Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCA5O60264 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 CICP23-201ENST00000605013 2741 ntBASIC18.95■□□□□ 0.62
SMARCA5O60264 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SMARCA5O60264 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SMARCA5O60264 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCA5O60264 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
SMARCA5O60264 AC134915.1-201ENST00000426461 574 ntBASIC18.95■□□□□ 0.62
SMARCA5O60264 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.95■□□□□ 0.62
SMARCA5O60264 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.95■□□□□ 0.62
SMARCA5O60264 AC104596.2-201ENST00000512793 793 ntBASIC18.95■□□□□ 0.62
SMARCA5O60264 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.95■□□□□ 0.62
SMARCA5O60264 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.95■□□□□ 0.62
SMARCA5O60264 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.95■□□□□ 0.62
SMARCA5O60264 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCA5O60264 WFDC1-204ENST00000613603 549 ntBASIC18.95■□□□□ 0.62
SMARCA5O60264 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.95■□□□□ 0.62
SMARCA5O60264 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCA5O60264 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SMARCA5O60264 AL136379.1-201ENST00000623471 2642 ntBASIC18.95■□□□□ 0.62
SMARCA5O60264 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCA5O60264 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCA5O60264 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCA5O60264 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.95■□□□□ 0.62
SMARCA5O60264 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SMARCA5O60264 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.94■□□□□ 0.62
SMARCA5O60264 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 AL158070.2-201ENST00000623713 1621 ntBASIC18.94■□□□□ 0.62
SMARCA5O60264 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.94■□□□□ 0.62
SMARCA5O60264 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.94■□□□□ 0.62
SMARCA5O60264 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.94■□□□□ 0.62
SMARCA5O60264 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.94■□□□□ 0.62
SMARCA5O60264 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.94■□□□□ 0.62
SMARCA5O60264 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SMARCA5O60264 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.94■□□□□ 0.62
SMARCA5O60264 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.94■□□□□ 0.62
SMARCA5O60264 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 AC012508.2-201ENST00000567613 1472 ntBASIC18.94■□□□□ 0.62
SMARCA5O60264 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SMARCA5O60264 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.94■□□□□ 0.62
SMARCA5O60264 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.94■□□□□ 0.62
SMARCA5O60264 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 AC093525.8-201ENST00000624099 1342 ntBASIC18.94■□□□□ 0.62
SMARCA5O60264 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.94■□□□□ 0.62
SMARCA5O60264 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.94■□□□□ 0.62
SMARCA5O60264 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCA5O60264 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.93■□□□□ 0.62
SMARCA5O60264 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCA5O60264 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.93■□□□□ 0.62
SMARCA5O60264 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCA5O60264 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCA5O60264 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SMARCA5O60264 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCA5O60264 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCA5O60264 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCA5O60264 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.93■□□□□ 0.62
SMARCA5O60264 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.93■□□□□ 0.62
SMARCA5O60264 C1QBPP1-201ENST00000400117 770 ntBASIC18.93■□□□□ 0.62
SMARCA5O60264 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.93■□□□□ 0.62
SMARCA5O60264 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.93■□□□□ 0.62
SMARCA5O60264 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCA5O60264 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.93■□□□□ 0.62
SMARCA5O60264 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.93■□□□□ 0.62
SMARCA5O60264 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.93■□□□□ 0.62
SMARCA5O60264 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.93■□□□□ 0.62
SMARCA5O60264 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SMARCA5O60264 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.93■□□□□ 0.62
SMARCA5O60264 TMEM261P1-201ENST00000604899 340 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms