Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SLC28A2O43868 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC28A2O43868 SERBP1P3-201ENST00000459980 809 ntBASIC14.91□□□□□ -0.02
SLC28A2O43868 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC28A2O43868 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC28A2O43868 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC28A2O43868 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC28A2O43868 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC28A2O43868 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 AC010319.3-201ENST00000597028 470 ntBASIC14.91□□□□□ -0.02
SLC28A2O43868 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC28A2O43868 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.91□□□□□ -0.02
SLC28A2O43868 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC28A2O43868 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC28A2O43868 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SLC28A2O43868 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC28A2O43868 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SLC28A2O43868 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC28A2O43868 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC28A2O43868 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC28A2O43868 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 AC093525.8-201ENST00000624099 1342 ntBASIC14.91□□□□□ -0.02
SLC28A2O43868 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC28A2O43868 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC28A2O43868 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SLC28A2O43868 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC28A2O43868 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 FAM220BP-201ENST00000377689 816 ntBASIC14.9□□□□□ -0.02
SLC28A2O43868 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SLC28A2O43868 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 AC005229.1-201ENST00000392885 409 ntBASIC14.9□□□□□ -0.02
SLC28A2O43868 MIR1247-201ENST00000408206 136 ntBASIC14.9□□□□□ -0.02
SLC28A2O43868 AC098850.1-201ENST00000419919 790 ntBASIC14.9□□□□□ -0.02
SLC28A2O43868 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC28A2O43868 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC28A2O43868 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.9□□□□□ -0.02
SLC28A2O43868 RNA5SP412-201ENST00000516234 123 ntBASIC14.9□□□□□ -0.02
SLC28A2O43868 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC28A2O43868 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC28A2O43868 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.9□□□□□ -0.02
SLC28A2O43868 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SLC28A2O43868 AL133215.2-201ENST00000609242 977 ntBASIC14.9□□□□□ -0.02
SLC28A2O43868 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC28A2O43868 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC28A2O43868 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SLC28A2O43868 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SLC28A2O43868 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC28A2O43868 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SLC28A2O43868 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC28A2O43868 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC28A2O43868 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SLC28A2O43868 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC28A2O43868 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC28A2O43868 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 REXO1L1P-202ENST00000608646 1974 ntBASIC14.89□□□□□ -0.03
SLC28A2O43868 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
SLC28A2O43868 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
SLC28A2O43868 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SLC28A2O43868 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC28A2O43868 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC28A2O43868 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC28A2O43868 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SLC28A2O43868 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC28A2O43868 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms