Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 OR2K2-202ENST00000374428 1038 ntBASIC20.59■□□□□ 0.89
PHF8Q9UPP1 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 RN7SL8P-201ENST00000461771 266 ntBASIC20.59■□□□□ 0.89
PHF8Q9UPP1 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 POU5F1P2-201ENST00000521750 823 ntBASIC20.59■□□□□ 0.89
PHF8Q9UPP1 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 AC005962.1-201ENST00000584100 773 ntBASIC20.59■□□□□ 0.89
PHF8Q9UPP1 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 AC007718.1-201ENST00000621078 280 ntBASIC20.59■□□□□ 0.89
PHF8Q9UPP1 RPL35-206ENST00000629845 340 ntTSL 5 BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.59■□□□□ 0.89
PHF8Q9UPP1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 SUPT20HL2-201ENST00000486479 2409 ntBASIC20.58■□□□□ 0.89
PHF8Q9UPP1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 AL138725.1-201ENST00000407347 1314 ntBASIC20.58■□□□□ 0.89
PHF8Q9UPP1 AC006058.4-201ENST00000624016 1670 ntBASIC20.58■□□□□ 0.89
PHF8Q9UPP1 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC20.58■□□□□ 0.89
PHF8Q9UPP1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PHF8Q9UPP1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.58■□□□□ 0.88
PHF8Q9UPP1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PHF8Q9UPP1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PHF8Q9UPP1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PHF8Q9UPP1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
PHF8Q9UPP1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PHF8Q9UPP1 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
PHF8Q9UPP1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 DNAJB1P1-201ENST00000429417 1024 ntBASIC20.57■□□□□ 0.88
PHF8Q9UPP1 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 STUB1-204ENST00000564370 875 ntTSL 2 BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 AC103810.10-201ENST00000606504 343 ntBASIC20.57■□□□□ 0.88
PHF8Q9UPP1 MIR6842-201ENST00000612539 65 ntBASIC20.57■□□□□ 0.88
PHF8Q9UPP1 WT1-AS_6.1-201ENST00000614919 121 ntBASIC20.57■□□□□ 0.88
PHF8Q9UPP1 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 AC024909.3-201ENST00000611513 2257 ntBASIC20.57■□□□□ 0.88
PHF8Q9UPP1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms