Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLN8Q9UBY8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLN8Q9UBY8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLN8Q9UBY8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CLN8Q9UBY8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CLN8Q9UBY8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLN8Q9UBY8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLN8Q9UBY8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLN8Q9UBY8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.09□□□□□ -0.31
CLN8Q9UBY8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLN8Q9UBY8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.09□□□□□ -0.31
CLN8Q9UBY8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLN8Q9UBY8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLN8Q9UBY8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLN8Q9UBY8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLN8Q9UBY8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.08□□□□□ -0.31
CLN8Q9UBY8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CLN8Q9UBY8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
CLN8Q9UBY8 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLN8Q9UBY8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.08□□□□□ -0.31
CLN8Q9UBY8 AC006486.2-201ENST00000624246 2199 ntBASIC13.08□□□□□ -0.31
CLN8Q9UBY8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLN8Q9UBY8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CLN8Q9UBY8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.08□□□□□ -0.31
CLN8Q9UBY8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLN8Q9UBY8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLN8Q9UBY8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 TMBIM7P-203ENST00000641617 1718 ntBASIC13.08□□□□□ -0.32
CLN8Q9UBY8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 AC074338.1-201ENST00000416825 156 ntBASIC13.08□□□□□ -0.32
CLN8Q9UBY8 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 AC097359.3-201ENST00000603982 1210 ntBASIC13.08□□□□□ -0.32
CLN8Q9UBY8 AC093726.1-201ENST00000608064 963 ntBASIC13.08□□□□□ -0.32
CLN8Q9UBY8 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLN8Q9UBY8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 OR2I1P-210ENST00000642037 4691 ntBASIC13.07□□□□□ -0.32
CLN8Q9UBY8 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 TOMM22P5-201ENST00000416399 439 ntBASIC13.07□□□□□ -0.32
CLN8Q9UBY8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.07□□□□□ -0.32
CLN8Q9UBY8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms