Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 AC005622.1-201ENST00000636801 1703 ntBASIC16.29■□□□□ 0.2
CD248Q9HCU0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 AL512384.1-201ENST00000406683 331 ntBASIC16.29■□□□□ 0.2
CD248Q9HCU0 AP006294.1-201ENST00000415407 339 ntBASIC16.29■□□□□ 0.2
CD248Q9HCU0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 AC132938.2-201ENST00000579188 680 ntBASIC16.29■□□□□ 0.2
CD248Q9HCU0 AC025048.3-201ENST00000590609 569 ntBASIC16.29■□□□□ 0.2
CD248Q9HCU0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 AC005702.4-201ENST00000618393 416 ntBASIC16.29■□□□□ 0.2
CD248Q9HCU0 MIR6069-201ENST00000620069 79 ntBASIC16.29■□□□□ 0.2
CD248Q9HCU0 AC007431.3-201ENST00000623221 587 ntBASIC16.29■□□□□ 0.2
CD248Q9HCU0 AL591163.1-201ENST00000641757 987 ntBASIC16.29■□□□□ 0.2
CD248Q9HCU0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CD248Q9HCU0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 AL359183.1-201ENST00000623796 2132 ntBASIC16.28■□□□□ 0.2
CD248Q9HCU0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 AC098850.1-201ENST00000419919 790 ntBASIC16.28■□□□□ 0.2
CD248Q9HCU0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CD248Q9HCU0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 LINC01144-201ENST00000626198 1710 ntBASIC16.28■□□□□ 0.2
CD248Q9HCU0 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD248Q9HCU0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD248Q9HCU0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms