Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AL627389.1-201ENST00000413508 1182 ntBASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AL157407.1-201ENST00000435784 904 ntBASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 MIR6842-201ENST00000612539 65 ntBASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AC007718.1-201ENST00000621078 280 ntBASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC19■□□□□ 0.63
CNTNAP4Q9C0A0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 CAP2P1-201ENST00000557743 1390 ntBASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 TLE1P1-201ENST00000422965 589 ntBASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 AC006122.1-201ENST00000493323 440 ntBASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 DNM1P30-201ENST00000563586 452 ntBASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.99■□□□□ 0.63
CNTNAP4Q9C0A0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 AL645933.1-201ENST00000440087 609 ntBASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNTNAP4Q9C0A0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms