Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 KRT18P66-201ENST00000452970 1269 ntBASIC15.13■□□□□ 0.01
CLDN23Q96B33 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 AP002803.1-201ENST00000528836 498 ntBASIC15.13■□□□□ 0.01
CLDN23Q96B33 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 MIR4649-201ENST00000582839 64 ntBASIC15.13■□□□□ 0.01
CLDN23Q96B33 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 AC009884.2-201ENST00000603110 324 ntBASIC15.13■□□□□ 0.01
CLDN23Q96B33 MIR6756-201ENST00000616240 63 ntBASIC15.13■□□□□ 0.01
CLDN23Q96B33 AC009084.3-201ENST00000623356 437 ntBASIC15.13■□□□□ 0.01
CLDN23Q96B33 Z98259.2-201ENST00000641583 609 ntBASIC15.13■□□□□ 0.01
CLDN23Q96B33 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 KRT8P21-201ENST00000430398 1491 ntBASIC15.13■□□□□ 0.01
CLDN23Q96B33 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN23Q96B33 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN23Q96B33 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 AC011676.5-201ENST00000624864 2660 ntBASIC15.12■□□□□ 0.01
CLDN23Q96B33 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 OR2K2-202ENST00000374428 1038 ntBASIC15.12■□□□□ 0.01
CLDN23Q96B33 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 AC011840.2-201ENST00000563063 1520 ntBASIC15.12■□□□□ 0.01
CLDN23Q96B33 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN23Q96B33 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN23Q96B33 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN23Q96B33 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN23Q96B33 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN23Q96B33 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN23Q96B33 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN23Q96B33 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN23Q96B33 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN23Q96B33 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN23Q96B33 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CLDN23Q96B33 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN23Q96B33 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN23Q96B33 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN23Q96B33 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN23Q96B33 AC026320.2-201ENST00000434379 478 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms