Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 BNIP3P1-202ENST00000550043 1585 ntBASIC13.72□□□□□ -0.21
RFT1Q96AA3 AC127383.1-201ENST00000444697 1800 ntBASIC13.72□□□□□ -0.21
RFT1Q96AA3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 TFAMP1-201ENST00000412727 736 ntBASIC13.72□□□□□ -0.21
RFT1Q96AA3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 AL671277.1-201ENST00000429656 993 ntBASIC13.72□□□□□ -0.21
RFT1Q96AA3 FAM58CP-201ENST00000435741 640 ntBASIC13.72□□□□□ -0.21
RFT1Q96AA3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 AC098859.1-201ENST00000502915 1238 ntBASIC13.72□□□□□ -0.21
RFT1Q96AA3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 AC073389.1-201ENST00000595595 795 ntBASIC13.72□□□□□ -0.21
RFT1Q96AA3 AC027601.4-201ENST00000611259 610 ntBASIC13.72□□□□□ -0.21
RFT1Q96AA3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 AL359183.1-201ENST00000623796 2132 ntBASIC13.72□□□□□ -0.21
RFT1Q96AA3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.72□□□□□ -0.21
RFT1Q96AA3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFT1Q96AA3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFT1Q96AA3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFT1Q96AA3 AC107918.4-201ENST00000641966 3141 ntBASIC13.71□□□□□ -0.21
RFT1Q96AA3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RFT1Q96AA3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFT1Q96AA3 AL928921.2-201ENST00000641325 2442 ntBASIC13.71□□□□□ -0.21
RFT1Q96AA3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RFT1Q96AA3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RFT1Q96AA3 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.71□□□□□ -0.21
RFT1Q96AA3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFT1Q96AA3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RFT1Q96AA3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFT1Q96AA3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RFT1Q96AA3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFT1Q96AA3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 AL355306.1-201ENST00000415580 579 ntBASIC13.71□□□□□ -0.21
RFT1Q96AA3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 AC243562.2-201ENST00000561247 970 ntBASIC13.71□□□□□ -0.21
RFT1Q96AA3 AC106730.1-201ENST00000566722 1090 ntBASIC13.71□□□□□ -0.21
RFT1Q96AA3 AC061975.2-201ENST00000581722 295 ntBASIC13.71□□□□□ -0.21
RFT1Q96AA3 AC024267.1-201ENST00000582320 895 ntBASIC13.71□□□□□ -0.21
RFT1Q96AA3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFT1Q96AA3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFT1Q96AA3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms