Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 AC140479.7-201ENST00000636301 2332 ntBASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 RPS8P6-201ENST00000426177 609 ntBASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 GPS2P2-201ENST00000430745 888 ntBASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 AL596442.2-201ENST00000610240 980 ntBASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 AC018529.1-201ENST00000613063 361 ntBASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 AC079781.4-201ENST00000641908 219 ntBASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTN4IP1Q8WWV3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 CICP14-201ENST00000629111 2732 ntBASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 AC117489.1-201ENST00000625169 3217 ntBASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 FAM8A3P-201ENST00000427218 844 ntBASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 SPDYE14P-201ENST00000442619 822 ntBASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 DNAJB3-202ENST00000449667 1266 ntBASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms