Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 AL139094.1-201ENST00000405549 1188 ntBASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 RN7SL769P-201ENST00000469386 295 ntBASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 AC025181.2-201ENST00000606994 802 ntBASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 AL603764.1-201ENST00000636452 321 ntBASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 AC138627.1-207ENST00000641560 1006 ntBASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 AC010491.1-201ENST00000563101 2797 ntBASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 AL023775.1-201ENST00000454907 1746 ntBASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SYNPOQ8N3V7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SYNPOQ8N3V7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.58■□□□□ 0.09
SYNPOQ8N3V7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SYNPOQ8N3V7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SYNPOQ8N3V7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
SYNPOQ8N3V7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SYNPOQ8N3V7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SYNPOQ8N3V7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SYNPOQ8N3V7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.58■□□□□ 0.09
SYNPOQ8N3V7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 AC148477.4-201ENST00000613430 1793 ntBASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 FAM8A4P-201ENST00000435433 1213 ntBASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 HIST2H2BC-201ENST00000498492 580 ntBASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 AC004066.1-201ENST00000502488 802 ntBASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYNPOQ8N3V7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms