Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 ACTBP11-201ENST00000436287 1126 ntBASIC23.67■■□□□ 1.38
VPS8Q8N3P4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 TCAF2P1-201ENST00000291129 2421 ntBASIC23.67■■□□□ 1.38
VPS8Q8N3P4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 AL096828.3-201ENST00000615354 462 ntBASIC23.67■■□□□ 1.38
VPS8Q8N3P4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
VPS8Q8N3P4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 MIR326-201ENST00000362220 95 ntBASIC23.66■■□□□ 1.38
VPS8Q8N3P4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 ALG3P1-201ENST00000508806 1114 ntBASIC23.66■■□□□ 1.38
VPS8Q8N3P4 GCOM2-201ENST00000509133 1104 ntBASIC23.66■■□□□ 1.38
VPS8Q8N3P4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 AC020910.5-201ENST00000623668 1865 ntBASIC23.66■■□□□ 1.38
VPS8Q8N3P4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS8Q8N3P4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 AP001002.3-201ENST00000623482 206 ntBASIC23.65■■□□□ 1.38
VPS8Q8N3P4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
VPS8Q8N3P4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS8Q8N3P4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS8Q8N3P4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS8Q8N3P4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC23.64■■□□□ 1.38
VPS8Q8N3P4 KRT8P4-201ENST00000509735 1454 ntBASIC23.64■■□□□ 1.38
VPS8Q8N3P4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
VPS8Q8N3P4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.38
VPS8Q8N3P4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS8Q8N3P4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS8Q8N3P4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC23.64■■□□□ 1.37
VPS8Q8N3P4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
VPS8Q8N3P4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
VPS8Q8N3P4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC23.64■■□□□ 1.37
VPS8Q8N3P4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
VPS8Q8N3P4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
VPS8Q8N3P4 MIR663B-201ENST00000408361 115 ntBASIC23.64■■□□□ 1.37
VPS8Q8N3P4 AC010141.1-201ENST00000411585 623 ntBASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms