Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 AC112482.1-201ENST00000492080 688 ntBASIC19.21■□□□□ 0.67
SKAP1Q86WV1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 YBX1P5-201ENST00000509441 847 ntBASIC19.21■□□□□ 0.67
SKAP1Q86WV1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 AC136759.1-202ENST00000530858 2194 ntBASIC19.21■□□□□ 0.67
SKAP1Q86WV1 AL512361.1-201ENST00000554200 418 ntBASIC19.21■□□□□ 0.67
SKAP1Q86WV1 AC005829.1-201ENST00000570002 483 ntBASIC19.21■□□□□ 0.67
SKAP1Q86WV1 AC007967.4-201ENST00000614700 386 ntBASIC19.21■□□□□ 0.67
SKAP1Q86WV1 MIR6080-201ENST00000617359 66 ntBASIC19.21■□□□□ 0.67
SKAP1Q86WV1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.21■□□□□ 0.67
SKAP1Q86WV1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 OS9-207ENST00000439210 1946 ntTSL 2 BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SKAP1Q86WV1 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC19.21■□□□□ 0.66
SKAP1Q86WV1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 FO393414.2-201ENST00000405153 598 ntBASIC19.2■□□□□ 0.66
SKAP1Q86WV1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 GRK6P1-201ENST00000400595 1711 ntBASIC19.2■□□□□ 0.66
SKAP1Q86WV1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SKAP1Q86WV1 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 R3HDM2P2-201ENST00000401880 2116 ntBASIC19.19■□□□□ 0.66
SKAP1Q86WV1 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 AC089987.1-201ENST00000551654 2209 ntBASIC19.19■□□□□ 0.66
SKAP1Q86WV1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 RPL5P21-201ENST00000404620 815 ntBASIC19.19■□□□□ 0.66
SKAP1Q86WV1 RPL13P2-201ENST00000440687 659 ntBASIC19.19■□□□□ 0.66
SKAP1Q86WV1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.19■□□□□ 0.66
SKAP1Q86WV1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 SLED1-202ENST00000512051 380 ntBASIC19.19■□□□□ 0.66
SKAP1Q86WV1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms