Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.48□□□□□ -0.41
CX3CL1P78423 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.48□□□□□ -0.41
CX3CL1P78423 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CX3CL1P78423 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.48□□□□□ -0.41
CX3CL1P78423 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
CX3CL1P78423 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.48□□□□□ -0.41
CX3CL1P78423 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.48□□□□□ -0.41
CX3CL1P78423 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CX3CL1P78423 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CX3CL1P78423 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.48□□□□□ -0.41
CX3CL1P78423 LINC00528-201ENST00000600723 2160 ntBASIC12.48□□□□□ -0.41
CX3CL1P78423 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CX3CL1P78423 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CX3CL1P78423 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CX3CL1P78423 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.48□□□□□ -0.41
CX3CL1P78423 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.48□□□□□ -0.41
CX3CL1P78423 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CX3CL1P78423 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.48□□□□□ -0.41
CX3CL1P78423 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.48□□□□□ -0.41
CX3CL1P78423 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.48□□□□□ -0.41
CX3CL1P78423 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.48□□□□□ -0.41
CX3CL1P78423 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.48□□□□□ -0.41
CX3CL1P78423 AC093214.1-201ENST00000511688 1107 ntBASIC12.48□□□□□ -0.41
CX3CL1P78423 SLED1-202ENST00000512051 380 ntBASIC12.48□□□□□ -0.41
CX3CL1P78423 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.48□□□□□ -0.41
CX3CL1P78423 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.48□□□□□ -0.41
CX3CL1P78423 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.48□□□□□ -0.41
CX3CL1P78423 AC027796.2-201ENST00000575326 344 ntBASIC12.48□□□□□ -0.41
CX3CL1P78423 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.48□□□□□ -0.41
CX3CL1P78423 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.48□□□□□ -0.41
CX3CL1P78423 AC005498.2-205ENST00000593218 784 ntBASIC12.48□□□□□ -0.41
CX3CL1P78423 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.48□□□□□ -0.41
CX3CL1P78423 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CX3CL1P78423 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CX3CL1P78423 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.48□□□□□ -0.41
CX3CL1P78423 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CX3CL1P78423 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CX3CL1P78423 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.48□□□□□ -0.41
CX3CL1P78423 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CX3CL1P78423 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.48□□□□□ -0.41
CX3CL1P78423 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CX3CL1P78423 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CX3CL1P78423 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CX3CL1P78423 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CX3CL1P78423 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CX3CL1P78423 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.48□□□□□ -0.41
CX3CL1P78423 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CX3CL1P78423 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CX3CL1P78423 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.48□□□□□ -0.41
CX3CL1P78423 AC009090.5-201ENST00000624886 2285 ntBASIC12.48□□□□□ -0.41
CX3CL1P78423 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.47□□□□□ -0.41
CX3CL1P78423 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.47□□□□□ -0.41
CX3CL1P78423 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.47□□□□□ -0.41
CX3CL1P78423 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.47□□□□□ -0.41
CX3CL1P78423 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CX3CL1P78423 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.47□□□□□ -0.41
CX3CL1P78423 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.47□□□□□ -0.41
CX3CL1P78423 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CX3CL1P78423 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.47□□□□□ -0.41
CX3CL1P78423 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.47□□□□□ -0.41
CX3CL1P78423 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CX3CL1P78423 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.47□□□□□ -0.41
CX3CL1P78423 AC009477.1-201ENST00000452936 217 ntBASIC12.47□□□□□ -0.41
CX3CL1P78423 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.47□□□□□ -0.41
CX3CL1P78423 AC004890.2-204ENST00000481968 304 ntBASIC12.47□□□□□ -0.41
CX3CL1P78423 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.47□□□□□ -0.41
CX3CL1P78423 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.47□□□□□ -0.41
CX3CL1P78423 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CX3CL1P78423 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.47□□□□□ -0.41
CX3CL1P78423 AF228730.6-201ENST00000641497 218 ntBASIC12.47□□□□□ -0.41
CX3CL1P78423 AC084121.3-201ENST00000641716 218 ntBASIC12.47□□□□□ -0.41
CX3CL1P78423 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.47□□□□□ -0.41
CX3CL1P78423 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
CX3CL1P78423 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
CX3CL1P78423 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CL1P78423 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.47□□□□□ -0.41
CX3CL1P78423 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CX3CL1P78423 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.47□□□□□ -0.41
CX3CL1P78423 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.47□□□□□ -0.41
CX3CL1P78423 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms