Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 HLA-H-201ENST00000383620 1096 ntBASIC14.2□□□□□ -0.14
CDH11P55287 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.2□□□□□ -0.14
CDH11P55287 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.2□□□□□ -0.14
CDH11P55287 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH11P55287 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH11P55287 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH11P55287 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.2□□□□□ -0.14
CDH11P55287 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.2□□□□□ -0.14
CDH11P55287 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.2□□□□□ -0.14
CDH11P55287 AC018529.1-201ENST00000613063 361 ntBASIC14.2□□□□□ -0.14
CDH11P55287 SPTSSB-204ENST00000617024 1292 ntBASIC14.2□□□□□ -0.14
CDH11P55287 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH11P55287 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CDH11P55287 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDH11P55287 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDH11P55287 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH11P55287 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH11P55287 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH11P55287 AJ011931.1-201ENST00000618749 2492 ntBASIC14.2□□□□□ -0.14
CDH11P55287 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CDH11P55287 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH11P55287 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH11P55287 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH11P55287 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH11P55287 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH11P55287 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH11P55287 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH11P55287 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH11P55287 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH11P55287 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH11P55287 ZBED1P1-201ENST00000502364 1930 ntBASIC14.19□□□□□ -0.14
CDH11P55287 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH11P55287 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH11P55287 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CDH11P55287 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH11P55287 AP3S2-216ENST00000617003 1561 ntBASIC14.19□□□□□ -0.14
CDH11P55287 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CDH11P55287 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH11P55287 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CDH11P55287 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH11P55287 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH11P55287 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH11P55287 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CDH11P55287 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CDH11P55287 AL512638.1-201ENST00000457493 794 ntBASIC14.19□□□□□ -0.14
CDH11P55287 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH11P55287 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH11P55287 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH11P55287 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.19□□□□□ -0.14
CDH11P55287 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.19□□□□□ -0.14
CDH11P55287 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH11P55287 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.19□□□□□ -0.14
CDH11P55287 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.19□□□□□ -0.14
CDH11P55287 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.19□□□□□ -0.14
CDH11P55287 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH11P55287 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH11P55287 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH11P55287 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH11P55287 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDH11P55287 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH11P55287 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH11P55287 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH11P55287 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH11P55287 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CDH11P55287 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH11P55287 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CDH11P55287 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH11P55287 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDH11P55287 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDH11P55287 AL359258.3-201ENST00000622910 2331 ntBASIC14.19□□□□□ -0.14
CDH11P55287 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
CDH11P55287 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH11P55287 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH11P55287 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH11P55287 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH11P55287 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH11P55287 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH11P55287 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH11P55287 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH11P55287 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDH11P55287 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH11P55287 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH11P55287 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH11P55287 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH11P55287 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.18□□□□□ -0.14
CDH11P55287 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH11P55287 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH11P55287 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH11P55287 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH11P55287 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH11P55287 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDH11P55287 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH11P55287 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH11P55287 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.18□□□□□ -0.14
CDH11P55287 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH11P55287 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.18□□□□□ -0.14
CDH11P55287 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.18□□□□□ -0.14
CDH11P55287 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH11P55287 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH11P55287 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms