Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCN3P51790 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.82■□□□□ 0.28
CLCN3P51790 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCN3P51790 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCN3P51790 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLCN3P51790 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCN3P51790 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLCN3P51790 CD8B2-202ENST00000417670 633 ntBASIC16.82■□□□□ 0.28
CLCN3P51790 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.82■□□□□ 0.28
CLCN3P51790 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.82■□□□□ 0.28
CLCN3P51790 GPR182-203ENST00000622922 591 ntBASIC16.82■□□□□ 0.28
CLCN3P51790 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 AC136621.1-201ENST00000624017 2304 ntBASIC16.82■□□□□ 0.28
CLCN3P51790 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
CLCN3P51790 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.82■□□□□ 0.28
CLCN3P51790 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLCN3P51790 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 AC055811.4-201ENST00000624039 1754 ntBASIC16.82■□□□□ 0.28
CLCN3P51790 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCN3P51790 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN3P51790 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLCN3P51790 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCN3P51790 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLCN3P51790 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCN3P51790 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLCN3P51790 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLCN3P51790 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 REXO1L4P-201ENST00000605109 1937 ntBASIC16.81■□□□□ 0.28
CLCN3P51790 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 MIR326-201ENST00000362220 95 ntBASIC16.81■□□□□ 0.28
CLCN3P51790 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCN3P51790 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCN3P51790 GHSR-202ENST00000427970 912 ntBASIC16.81■□□□□ 0.28
CLCN3P51790 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 AC245100.3-201ENST00000441281 285 ntBASIC16.81■□□□□ 0.28
CLCN3P51790 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLCN3P51790 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCN3P51790 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.81■□□□□ 0.28
CLCN3P51790 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CLCN3P51790 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.81■□□□□ 0.28
CLCN3P51790 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CLCN3P51790 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN3P51790 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN3P51790 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN3P51790 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLCN3P51790 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CLCN3P51790 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLCN3P51790 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLCN3P51790 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN3P51790 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN3P51790 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN3P51790 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CLCN3P51790 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN3P51790 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN3P51790 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN3P51790 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN3P51790 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN3P51790 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN3P51790 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CLCN3P51790 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCN3P51790 POM121L8P-201ENST00000417732 1281 ntBASIC16.8■□□□□ 0.28
CLCN3P51790 POM121L9P-203ENST00000441984 1285 ntBASIC16.8■□□□□ 0.28
CLCN3P51790 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCN3P51790 AP006547.1-201ENST00000563435 692 ntBASIC16.8■□□□□ 0.28
CLCN3P51790 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN3P51790 AC004466.1-201ENST00000599515 1080 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms