Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.75□□□□□ -0.21
CSNK1A1P48729 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CSNK1A1P48729 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.75□□□□□ -0.21
CSNK1A1P48729 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CSNK1A1P48729 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSNK1A1P48729 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSNK1A1P48729 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.75□□□□□ -0.21
CSNK1A1P48729 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.75□□□□□ -0.21
CSNK1A1P48729 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSNK1A1P48729 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.75□□□□□ -0.21
CSNK1A1P48729 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSNK1A1P48729 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CSNK1A1P48729 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CSNK1A1P48729 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSNK1A1P48729 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.74□□□□□ -0.21
CSNK1A1P48729 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CSNK1A1P48729 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.74□□□□□ -0.21
CSNK1A1P48729 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CSNK1A1P48729 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.74□□□□□ -0.21
CSNK1A1P48729 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.74□□□□□ -0.21
CSNK1A1P48729 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.74□□□□□ -0.21
CSNK1A1P48729 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.74□□□□□ -0.21
CSNK1A1P48729 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.74□□□□□ -0.21
CSNK1A1P48729 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.74□□□□□ -0.21
CSNK1A1P48729 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.74□□□□□ -0.21
CSNK1A1P48729 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.74□□□□□ -0.21
CSNK1A1P48729 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.74□□□□□ -0.21
CSNK1A1P48729 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CSNK1A1P48729 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1A1P48729 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.73□□□□□ -0.21
CSNK1A1P48729 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 UGT1A2P-201ENST00000454886 866 ntBASIC13.73□□□□□ -0.21
CSNK1A1P48729 AC093004.1-201ENST00000508850 424 ntBASIC13.73□□□□□ -0.21
CSNK1A1P48729 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 AC023310.3-201ENST00000557027 670 ntBASIC13.73□□□□□ -0.21
CSNK1A1P48729 AC100756.1-201ENST00000562736 682 ntBASIC13.73□□□□□ -0.21
CSNK1A1P48729 AC138749.3-201ENST00000567691 622 ntBASIC13.73□□□□□ -0.21
CSNK1A1P48729 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 AC116165.1-201ENST00000611806 668 ntBASIC13.73□□□□□ -0.21
CSNK1A1P48729 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1A1P48729 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.73□□□□□ -0.21
CSNK1A1P48729 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms