Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF4P48230 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF4P48230 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.14■□□□□ 0.33
TM4SF4P48230 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.14■□□□□ 0.33
TM4SF4P48230 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF4P48230 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF4P48230 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF4P48230 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.13■□□□□ 0.33
TM4SF4P48230 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF4P48230 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF4P48230 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.13■□□□□ 0.33
TM4SF4P48230 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF4P48230 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.13■□□□□ 0.33
TM4SF4P48230 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF4P48230 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF4P48230 AC006449.5-201ENST00000610658 2098 ntBASIC17.13■□□□□ 0.33
TM4SF4P48230 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF4P48230 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF4P48230 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF4P48230 AQP7P5-201ENST00000428759 1049 ntBASIC17.13■□□□□ 0.33
TM4SF4P48230 AQP7P4-201ENST00000447083 1042 ntBASIC17.13■□□□□ 0.33
TM4SF4P48230 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF4P48230 AL035414.1-201ENST00000451327 857 ntBASIC17.13■□□□□ 0.33
TM4SF4P48230 AQP7P2-201ENST00000453967 1041 ntBASIC17.13■□□□□ 0.33
TM4SF4P48230 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC17.13■□□□□ 0.33
TM4SF4P48230 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.13■□□□□ 0.33
TM4SF4P48230 EIF5AP2-201ENST00000585668 1047 ntBASIC17.13■□□□□ 0.33
TM4SF4P48230 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.13■□□□□ 0.33
TM4SF4P48230 AQP7P3-201ENST00000624547 1041 ntBASIC17.13■□□□□ 0.33
TM4SF4P48230 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.13■□□□□ 0.33
TM4SF4P48230 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.13■□□□□ 0.33
TM4SF4P48230 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.13■□□□□ 0.33
TM4SF4P48230 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF4P48230 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TM4SF4P48230 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF4P48230 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TM4SF4P48230 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.13■□□□□ 0.33
TM4SF4P48230 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF4P48230 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM4SF4P48230 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.12■□□□□ 0.33
TM4SF4P48230 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.12■□□□□ 0.33
TM4SF4P48230 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.12■□□□□ 0.33
TM4SF4P48230 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.12■□□□□ 0.33
TM4SF4P48230 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.12■□□□□ 0.33
TM4SF4P48230 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.12■□□□□ 0.33
TM4SF4P48230 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.12■□□□□ 0.33
TM4SF4P48230 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TM4SF4P48230 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TM4SF4P48230 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TM4SF4P48230 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TM4SF4P48230 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF4P48230 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TM4SF4P48230 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.11■□□□□ 0.33
TM4SF4P48230 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.11■□□□□ 0.33
TM4SF4P48230 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.11■□□□□ 0.33
TM4SF4P48230 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF4P48230 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF4P48230 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.11■□□□□ 0.33
TM4SF4P48230 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TM4SF4P48230 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TM4SF4P48230 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TM4SF4P48230 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC17.11■□□□□ 0.33
TM4SF4P48230 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.11■□□□□ 0.33
TM4SF4P48230 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF4P48230 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.11■□□□□ 0.33
TM4SF4P48230 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
TM4SF4P48230 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TM4SF4P48230 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF4P48230 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.11■□□□□ 0.33
TM4SF4P48230 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.11■□□□□ 0.33
TM4SF4P48230 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.11■□□□□ 0.33
TM4SF4P48230 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF4P48230 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TM4SF4P48230 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF4P48230 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF4P48230 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF4P48230 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.11■□□□□ 0.33
TM4SF4P48230 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF4P48230 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM4SF4P48230 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.11■□□□□ 0.33
TM4SF4P48230 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TM4SF4P48230 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TM4SF4P48230 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms