Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.68□□□□□ -0.38
NKX2-1P43699 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 AC097359.2-201ENST00000604992 2389 ntBASIC12.68□□□□□ -0.38
NKX2-1P43699 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.68□□□□□ -0.38
NKX2-1P43699 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.68□□□□□ -0.38
NKX2-1P43699 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NKX2-1P43699 KRT18P67-201ENST00000432816 1264 ntBASIC12.68□□□□□ -0.38
NKX2-1P43699 FAM197Y8-203ENST00000450145 560 ntBASIC12.68□□□□□ -0.38
NKX2-1P43699 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
NKX2-1P43699 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.68□□□□□ -0.38
NKX2-1P43699 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.68□□□□□ -0.38
NKX2-1P43699 AC012640.2-201ENST00000561606 901 ntBASIC12.68□□□□□ -0.38
NKX2-1P43699 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.68□□□□□ -0.38
NKX2-1P43699 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.68□□□□□ -0.38
NKX2-1P43699 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.68□□□□□ -0.38
NKX2-1P43699 AC117500.6-201ENST00000624871 588 ntBASIC12.68□□□□□ -0.38
NKX2-1P43699 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NKX2-1P43699 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
NKX2-1P43699 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
NKX2-1P43699 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.68□□□□□ -0.38
NKX2-1P43699 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 AC084364.1-201ENST00000551967 1556 ntBASIC12.68□□□□□ -0.38
NKX2-1P43699 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
NKX2-1P43699 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
NKX2-1P43699 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 AL136982.4-201ENST00000437689 1740 ntBASIC12.68□□□□□ -0.38
NKX2-1P43699 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.68□□□□□ -0.38
NKX2-1P43699 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
NKX2-1P43699 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.68□□□□□ -0.38
NKX2-1P43699 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-1P43699 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.67□□□□□ -0.38
NKX2-1P43699 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.67□□□□□ -0.38
NKX2-1P43699 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.67□□□□□ -0.38
NKX2-1P43699 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.67□□□□□ -0.38
NKX2-1P43699 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
NKX2-1P43699 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
NKX2-1P43699 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 CRYGEP-201ENST00000412192 528 ntBASIC12.67□□□□□ -0.38
NKX2-1P43699 IGLL3P-201ENST00000412472 434 ntBASIC12.67□□□□□ -0.38
NKX2-1P43699 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
NKX2-1P43699 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.67□□□□□ -0.38
NKX2-1P43699 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.67□□□□□ -0.38
NKX2-1P43699 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.67□□□□□ -0.38
NKX2-1P43699 AC096734.2-201ENST00000562054 433 ntBASIC12.67□□□□□ -0.38
NKX2-1P43699 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.67□□□□□ -0.38
NKX2-1P43699 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.67□□□□□ -0.38
NKX2-1P43699 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.67□□□□□ -0.38
NKX2-1P43699 AC023141.13-201ENST00000604991 943 ntBASIC12.67□□□□□ -0.38
NKX2-1P43699 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.67□□□□□ -0.38
NKX2-1P43699 TP73-AS1-207ENST00000624167 988 ntBASIC12.67□□□□□ -0.38
NKX2-1P43699 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.67□□□□□ -0.38
NKX2-1P43699 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.67□□□□□ -0.38
NKX2-1P43699 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
NKX2-1P43699 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.67□□□□□ -0.38
NKX2-1P43699 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX2-1P43699 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms