Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
CKS2P33552 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CKS2P33552 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
CKS2P33552 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
CKS2P33552 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
CKS2P33552 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.39□□□□□ -0.59
CKS2P33552 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC11.39□□□□□ -0.59
CKS2P33552 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.39□□□□□ -0.59
CKS2P33552 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CKS2P33552 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
CKS2P33552 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
CKS2P33552 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CKS2P33552 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.39□□□□□ -0.59
CKS2P33552 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 MBLAC2-202ENST00000514906 1936 ntBASIC11.39□□□□□ -0.59
CKS2P33552 PCDHA5-203ENST00000614258 4248 ntBASIC11.39□□□□□ -0.59
CKS2P33552 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.39□□□□□ -0.59
CKS2P33552 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 FAM185BP-201ENST00000443595 716 ntBASIC11.39□□□□□ -0.59
CKS2P33552 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.39□□□□□ -0.59
CKS2P33552 AC136632.2-201ENST00000512891 861 ntBASIC11.39□□□□□ -0.59
CKS2P33552 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
CKS2P33552 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.39□□□□□ -0.59
CKS2P33552 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.39□□□□□ -0.59
CKS2P33552 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.39□□□□□ -0.59
CKS2P33552 AL078644.1-201ENST00000609881 752 ntBASIC11.39□□□□□ -0.59
CKS2P33552 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC11.39□□□□□ -0.59
CKS2P33552 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.39□□□□□ -0.59
CKS2P33552 AL355877.3-201ENST00000622820 899 ntBASIC11.39□□□□□ -0.59
CKS2P33552 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.39□□□□□ -0.59
CKS2P33552 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.39□□□□□ -0.59
CKS2P33552 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC11.39□□□□□ -0.59
CKS2P33552 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
CKS2P33552 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CKS2P33552 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS2P33552 AC073957.3-201ENST00000609998 6758 ntBASIC11.39□□□□□ -0.59
CKS2P33552 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
CKS2P33552 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CKS2P33552 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CKS2P33552 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
CKS2P33552 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CKS2P33552 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
CKS2P33552 GUK1-204ENST00000366721 689 ntTSL 3 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms