Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC19.6■□□□□ 0.73
RXRBP28702 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC19.6■□□□□ 0.73
RXRBP28702 AC027601.3-201ENST00000622907 509 ntBASIC19.6■□□□□ 0.73
RXRBP28702 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC19.6■□□□□ 0.73
RXRBP28702 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.6■□□□□ 0.73
RXRBP28702 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.6■□□□□ 0.73
RXRBP28702 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.6■□□□□ 0.73
RXRBP28702 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RXRBP28702 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.6■□□□□ 0.73
RXRBP28702 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.6■□□□□ 0.73
RXRBP28702 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RXRBP28702 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.59■□□□□ 0.73
RXRBP28702 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RXRBP28702 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.59■□□□□ 0.73
RXRBP28702 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
RXRBP28702 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RXRBP28702 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 FAM197Y6-201ENST00000420524 766 ntBASIC19.59■□□□□ 0.73
RXRBP28702 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC19.59■□□□□ 0.73
RXRBP28702 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC19.59■□□□□ 0.73
RXRBP28702 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.59■□□□□ 0.73
RXRBP28702 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC19.59■□□□□ 0.73
RXRBP28702 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC19.59■□□□□ 0.73
RXRBP28702 PSME2-217ENST00000615264 874 ntTSL 5 BASIC19.59■□□□□ 0.73
RXRBP28702 AC090510.3-201ENST00000615831 821 ntBASIC19.59■□□□□ 0.73
RXRBP28702 PSME2-218ENST00000630027 185 ntTSL 3 BASIC19.59■□□□□ 0.73
RXRBP28702 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC19.59■□□□□ 0.73
RXRBP28702 AC018629.1-201ENST00000623381 1736 ntBASIC19.59■□□□□ 0.73
RXRBP28702 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RXRBP28702 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RXRBP28702 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.59■□□□□ 0.73
RXRBP28702 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RXRBP28702 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RXRBP28702 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RXRBP28702 HLF-202ENST00000430986 1385 ntTSL 2 BASIC19.58■□□□□ 0.73
RXRBP28702 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.58■□□□□ 0.73
RXRBP28702 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RXRBP28702 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RXRBP28702 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.58■□□□□ 0.73
RXRBP28702 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RXRBP28702 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
RXRBP28702 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RXRBP28702 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RXRBP28702 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RXRBP28702 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.58■□□□□ 0.73
RXRBP28702 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RXRBP28702 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RXRBP28702 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RXRBP28702 RN7SKP230-201ENST00000365642 335 ntBASIC19.58■□□□□ 0.72
RXRBP28702 AC106827.1-201ENST00000366454 431 ntBASIC19.58■□□□□ 0.72
RXRBP28702 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC19.58■□□□□ 0.72
RXRBP28702 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC19.58■□□□□ 0.72
RXRBP28702 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC19.58■□□□□ 0.72
RXRBP28702 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC19.58■□□□□ 0.72
RXRBP28702 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.72
RXRBP28702 AC092862.1-201ENST00000541534 533 ntBASIC19.58■□□□□ 0.72
RXRBP28702 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC19.58■□□□□ 0.72
RXRBP28702 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC19.58■□□□□ 0.72
RXRBP28702 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC19.58■□□□□ 0.72
RXRBP28702 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RXRBP28702 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.58■□□□□ 0.72
RXRBP28702 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RXRBP28702 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RXRBP28702 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RXRBP28702 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.58■□□□□ 0.72
RXRBP28702 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RXRBP28702 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RXRBP28702 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
RXRBP28702 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RXRBP28702 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
RXRBP28702 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RXRBP28702 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RXRBP28702 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
RXRBP28702 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RXRBP28702 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RXRBP28702 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RXRBP28702 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RXRBP28702 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RXRBP28702 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RXRBP28702 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms