Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC12.55□□□□□ -0.4
APCP25054 EMC4-208ENST00000559078 599 ntTSL 3 BASIC12.55□□□□□ -0.4
APCP25054 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC12.55□□□□□ -0.4
APCP25054 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC12.55□□□□□ -0.4
APCP25054 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC12.55□□□□□ -0.4
APCP25054 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC12.55□□□□□ -0.4
APCP25054 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC12.55□□□□□ -0.4
APCP25054 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
APCP25054 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APCP25054 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APCP25054 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APCP25054 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APCP25054 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
APCP25054 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC12.55□□□□□ -0.4
APCP25054 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
APCP25054 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.55□□□□□ -0.4
APCP25054 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APCP25054 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.54□□□□□ -0.4
APCP25054 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
APCP25054 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.54□□□□□ -0.4
APCP25054 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.54□□□□□ -0.4
APCP25054 CTBP2P8-201ENST00000422584 1330 ntBASIC12.54□□□□□ -0.4
APCP25054 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 SURF4-203ENST00000371991 715 ntTSL 3 BASIC12.54□□□□□ -0.4
APCP25054 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
APCP25054 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.54□□□□□ -0.4
APCP25054 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC12.54□□□□□ -0.4
APCP25054 AC006122.1-201ENST00000493323 440 ntBASIC12.54□□□□□ -0.4
APCP25054 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.54□□□□□ -0.4
APCP25054 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC12.54□□□□□ -0.4
APCP25054 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC12.54□□□□□ -0.4
APCP25054 CYP4F36P-201ENST00000589193 186 ntBASIC12.54□□□□□ -0.4
APCP25054 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
APCP25054 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.54□□□□□ -0.4
APCP25054 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC12.54□□□□□ -0.4
APCP25054 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.54□□□□□ -0.4
APCP25054 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.54□□□□□ -0.4
APCP25054 RNA5SP359-201ENST00000364838 113 ntBASIC12.54□□□□□ -0.4
APCP25054 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC12.54□□□□□ -0.4
APCP25054 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.54□□□□□ -0.4
APCP25054 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC12.54□□□□□ -0.4
APCP25054 AC023141.7-201ENST00000430646 407 ntBASIC12.54□□□□□ -0.4
APCP25054 XBP1P1-201ENST00000436573 652 ntBASIC12.54□□□□□ -0.4
APCP25054 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC12.54□□□□□ -0.4
APCP25054 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 AC108724.1-201ENST00000481669 352 ntBASIC12.54□□□□□ -0.4
APCP25054 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.54□□□□□ -0.4
APCP25054 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 AC092862.1-201ENST00000541534 533 ntBASIC12.54□□□□□ -0.4
APCP25054 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 USB1-205ENST00000561743 1135 ntTSL 3 BASIC12.54□□□□□ -0.4
APCP25054 MIR6746-201ENST00000620971 63 ntBASIC12.54□□□□□ -0.4
APCP25054 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APCP25054 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 MIR648-201ENST00000385046 94 ntBASIC12.53□□□□□ -0.4
APCP25054 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.53□□□□□ -0.4
APCP25054 RPL35P9-201ENST00000446059 350 ntBASIC12.53□□□□□ -0.4
APCP25054 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC12.53□□□□□ -0.4
APCP25054 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC12.53□□□□□ -0.4
APCP25054 AL353622.2-201ENST00000605846 425 ntBASIC12.53□□□□□ -0.4
APCP25054 AC008972.2-201ENST00000606587 494 ntBASIC12.53□□□□□ -0.4
APCP25054 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.53□□□□□ -0.4
APCP25054 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.53□□□□□ -0.4
APCP25054 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.53□□□□□ -0.4
APCP25054 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
APCP25054 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC12.53□□□□□ -0.4
APCP25054 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
APCP25054 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.53□□□□□ -0.4
APCP25054 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC12.53□□□□□ -0.4
APCP25054 SRP14-204ENST00000558720 780 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms