Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.47□□□□□ -0.09
CHMP24386 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CHMP24386 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CHMP24386 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.47□□□□□ -0.09
CHMP24386 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.47□□□□□ -0.09
CHMP24386 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CHMP24386 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.47□□□□□ -0.09
CHMP24386 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.47□□□□□ -0.09
CHMP24386 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP24386 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.47□□□□□ -0.09
CHMP24386 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.47□□□□□ -0.09
CHMP24386 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.47□□□□□ -0.09
CHMP24386 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP24386 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.47□□□□□ -0.09
CHMP24386 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.47□□□□□ -0.09
CHMP24386 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.47□□□□□ -0.09
CHMP24386 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.47□□□□□ -0.09
CHMP24386 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP24386 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.47□□□□□ -0.09
CHMP24386 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CHMP24386 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CHMP24386 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP24386 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP24386 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CHMP24386 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.47□□□□□ -0.09
CHMP24386 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CHMP24386 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP24386 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.46□□□□□ -0.09
CHMP24386 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.46□□□□□ -0.09
CHMP24386 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CHMP24386 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CHMP24386 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CHMP24386 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.46□□□□□ -0.09
CHMP24386 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CHMP24386 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.46□□□□□ -0.09
CHMP24386 MRPS18AP1-201ENST00000414458 589 ntBASIC14.46□□□□□ -0.09
CHMP24386 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.46□□□□□ -0.09
CHMP24386 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.46□□□□□ -0.09
CHMP24386 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.46□□□□□ -0.09
CHMP24386 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 AC010336.2-201ENST00000564226 506 ntBASIC14.46□□□□□ -0.09
CHMP24386 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.46□□□□□ -0.09
CHMP24386 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CHMP24386 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.46□□□□□ -0.09
CHMP24386 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
CHMP24386 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 KRT8P37-201ENST00000451609 1420 ntBASIC14.46□□□□□ -0.09
CHMP24386 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.46□□□□□ -0.09
CHMP24386 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
CHMP24386 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP24386 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHMP24386 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
CHMP24386 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHMP24386 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHMP24386 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.45□□□□□ -0.1
CHMP24386 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CHMP24386 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.45□□□□□ -0.1
CHMP24386 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms