Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA6P23229 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ITGA6P23229 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA6P23229 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.8■□□□□ 0.6
ITGA6P23229 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA6P23229 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA6P23229 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA6P23229 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA6P23229 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ITGA6P23229 AL137783.1-201ENST00000623494 1896 ntBASIC18.8■□□□□ 0.6
ITGA6P23229 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA6P23229 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.79■□□□□ 0.6
ITGA6P23229 HYMAI-201ENST00000635591 3347 ntBASIC18.79■□□□□ 0.6
ITGA6P23229 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.79■□□□□ 0.6
ITGA6P23229 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ITGA6P23229 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.79■□□□□ 0.6
ITGA6P23229 KRT8P4-201ENST00000509735 1454 ntBASIC18.79■□□□□ 0.6
ITGA6P23229 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ITGA6P23229 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.79■□□□□ 0.6
ITGA6P23229 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.79■□□□□ 0.6
ITGA6P23229 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.79■□□□□ 0.6
ITGA6P23229 HSPB1P2-201ENST00000448722 546 ntBASIC18.79■□□□□ 0.6
ITGA6P23229 MESTP3-201ENST00000503460 968 ntBASIC18.79■□□□□ 0.6
ITGA6P23229 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.79■□□□□ 0.6
ITGA6P23229 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.79■□□□□ 0.6
ITGA6P23229 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ITGA6P23229 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 AC018735.1-201ENST00000437208 1502 ntBASIC18.79■□□□□ 0.6
ITGA6P23229 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.79■□□□□ 0.6
ITGA6P23229 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.79■□□□□ 0.6
ITGA6P23229 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ITGA6P23229 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA6P23229 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ITGA6P23229 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.78■□□□□ 0.6
ITGA6P23229 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ITGA6P23229 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.78■□□□□ 0.6
ITGA6P23229 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.78■□□□□ 0.6
ITGA6P23229 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.78■□□□□ 0.6
ITGA6P23229 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.78■□□□□ 0.6
ITGA6P23229 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.78■□□□□ 0.6
ITGA6P23229 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
ITGA6P23229 MIR663B-201ENST00000408361 115 ntBASIC18.78■□□□□ 0.6
ITGA6P23229 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.78■□□□□ 0.6
ITGA6P23229 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.78■□□□□ 0.6
ITGA6P23229 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.78■□□□□ 0.6
ITGA6P23229 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.78■□□□□ 0.6
ITGA6P23229 KRT8P13-201ENST00000463294 1010 ntBASIC18.78■□□□□ 0.6
ITGA6P23229 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.78■□□□□ 0.6
ITGA6P23229 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.78■□□□□ 0.6
ITGA6P23229 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.78■□□□□ 0.6
ITGA6P23229 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.78■□□□□ 0.6
ITGA6P23229 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ITGA6P23229 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.78■□□□□ 0.6
ITGA6P23229 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ITGA6P23229 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.78■□□□□ 0.6
ITGA6P23229 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.78■□□□□ 0.6
ITGA6P23229 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
ITGA6P23229 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.78■□□□□ 0.6
ITGA6P23229 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.78■□□□□ 0.6
ITGA6P23229 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.78■□□□□ 0.6
ITGA6P23229 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.78■□□□□ 0.6
ITGA6P23229 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.78■□□□□ 0.6
ITGA6P23229 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA6P23229 AC012508.2-201ENST00000567613 1472 ntBASIC18.77■□□□□ 0.6
ITGA6P23229 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ITGA6P23229 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA6P23229 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA6P23229 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms