Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.57□□□□□ -0.24
ATF1P18846 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 AC113367.3-201ENST00000508316 1912 ntBASIC13.57□□□□□ -0.24
ATF1P18846 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ATF1P18846 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.57□□□□□ -0.24
ATF1P18846 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.57□□□□□ -0.24
ATF1P18846 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ATF1P18846 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.57□□□□□ -0.24
ATF1P18846 RPL5P21-201ENST00000404620 815 ntBASIC13.57□□□□□ -0.24
ATF1P18846 AC136604.1-201ENST00000418535 575 ntBASIC13.57□□□□□ -0.24
ATF1P18846 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 POLD2P1-201ENST00000511220 997 ntBASIC13.57□□□□□ -0.24
ATF1P18846 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.57□□□□□ -0.24
ATF1P18846 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.57□□□□□ -0.24
ATF1P18846 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.57□□□□□ -0.24
ATF1P18846 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.57□□□□□ -0.24
ATF1P18846 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.57□□□□□ -0.24
ATF1P18846 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ATF1P18846 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.57□□□□□ -0.24
ATF1P18846 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.57□□□□□ -0.24
ATF1P18846 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ATF1P18846 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 AL607033.1-201ENST00000623900 1599 ntBASIC13.57□□□□□ -0.24
ATF1P18846 AP001267.2-201ENST00000532619 2086 ntBASIC13.57□□□□□ -0.24
ATF1P18846 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATF1P18846 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
ATF1P18846 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ATF1P18846 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ATF1P18846 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
ATF1P18846 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ATF1P18846 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ATF1P18846 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 AC018529.2-202ENST00000611482 3087 ntBASIC13.56□□□□□ -0.24
ATF1P18846 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ATF1P18846 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ATF1P18846 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.56□□□□□ -0.24
ATF1P18846 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ATF1P18846 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.56□□□□□ -0.24
ATF1P18846 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.56□□□□□ -0.24
ATF1P18846 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.56□□□□□ -0.24
ATF1P18846 MIR574-201ENST00000385209 96 ntBASIC13.56□□□□□ -0.24
ATF1P18846 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.56□□□□□ -0.24
ATF1P18846 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ATF1P18846 AL353705.2-201ENST00000428243 662 ntBASIC13.56□□□□□ -0.24
ATF1P18846 AC005237.2-201ENST00000434368 219 ntBASIC13.56□□□□□ -0.24
ATF1P18846 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.56□□□□□ -0.24
ATF1P18846 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.56□□□□□ -0.24
ATF1P18846 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.56□□□□□ -0.24
ATF1P18846 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
ATF1P18846 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
ATF1P18846 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.56□□□□□ -0.24
ATF1P18846 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.56□□□□□ -0.24
ATF1P18846 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.56□□□□□ -0.24
ATF1P18846 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.56□□□□□ -0.24
ATF1P18846 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.56□□□□□ -0.24
ATF1P18846 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.56□□□□□ -0.24
ATF1P18846 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.56□□□□□ -0.24
ATF1P18846 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ATF1P18846 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.56□□□□□ -0.24
ATF1P18846 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms