Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 AC092127.1-201ENST00000567093 3455 ntBASIC15.56■□□□□ 0.08
VCLP18206 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.56■□□□□ 0.08
VCLP18206 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 AC136604.1-201ENST00000418535 575 ntBASIC15.56■□□□□ 0.08
VCLP18206 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.56■□□□□ 0.08
VCLP18206 AC093004.1-201ENST00000508850 424 ntBASIC15.56■□□□□ 0.08
VCLP18206 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
VCLP18206 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
VCLP18206 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.56■□□□□ 0.08
VCLP18206 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.56■□□□□ 0.08
VCLP18206 MIR4313-201ENST00000580760 101 ntBASIC15.56■□□□□ 0.08
VCLP18206 AC138761.1-201ENST00000584393 385 ntBASIC15.56■□□□□ 0.08
VCLP18206 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.56■□□□□ 0.08
VCLP18206 AC027307.3-201ENST00000594262 1100 ntBASIC15.56■□□□□ 0.08
VCLP18206 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.56■□□□□ 0.08
VCLP18206 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.56■□□□□ 0.08
VCLP18206 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.56■□□□□ 0.08
VCLP18206 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
VCLP18206 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VCLP18206 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.56■□□□□ 0.08
VCLP18206 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.56■□□□□ 0.08
VCLP18206 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.56■□□□□ 0.08
VCLP18206 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.56■□□□□ 0.08
VCLP18206 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
VCLP18206 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VCLP18206 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
VCLP18206 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VCLP18206 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VCLP18206 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
VCLP18206 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.55■□□□□ 0.08
VCLP18206 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.55■□□□□ 0.08
VCLP18206 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.55■□□□□ 0.08
VCLP18206 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 AC087481.3-201ENST00000602886 1894 ntBASIC15.55■□□□□ 0.08
VCLP18206 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.55■□□□□ 0.08
VCLP18206 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
VCLP18206 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.08
VCLP18206 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.55■□□□□ 0.08
VCLP18206 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
VCLP18206 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 AL391825.1-201ENST00000457671 1364 ntBASIC15.55■□□□□ 0.08
VCLP18206 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
VCLP18206 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.55■□□□□ 0.08
VCLP18206 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.55■□□□□ 0.08
VCLP18206 TARDBPP1-201ENST00000442013 1203 ntBASIC15.55■□□□□ 0.08
VCLP18206 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.55■□□□□ 0.08
VCLP18206 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.55■□□□□ 0.08
VCLP18206 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.55■□□□□ 0.08
VCLP18206 SPTLC1P1-201ENST00000447199 261 ntBASIC15.55■□□□□ 0.08
VCLP18206 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.55■□□□□ 0.08
VCLP18206 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.55■□□□□ 0.08
VCLP18206 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.55■□□□□ 0.08
VCLP18206 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.55■□□□□ 0.08
VCLP18206 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.55■□□□□ 0.08
VCLP18206 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.55■□□□□ 0.08
VCLP18206 AC092337.1-201ENST00000568699 1129 ntBASIC15.55■□□□□ 0.08
VCLP18206 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.55■□□□□ 0.08
VCLP18206 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.55■□□□□ 0.08
VCLP18206 SRD5A3P1-201ENST00000603021 949 ntBASIC15.55■□□□□ 0.08
VCLP18206 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VCLP18206 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VCLP18206 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms