Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.52■□□□□ 0.24
SYN1P17600 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYN1P17600 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYN1P17600 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.52■□□□□ 0.24
SYN1P17600 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYN1P17600 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SYN1P17600 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.52■□□□□ 0.24
SYN1P17600 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.52■□□□□ 0.24
SYN1P17600 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.52■□□□□ 0.24
SYN1P17600 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.52■□□□□ 0.24
SYN1P17600 SCARNA21-201ENST00000517026 139 ntBASIC16.52■□□□□ 0.24
SYN1P17600 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.52■□□□□ 0.24
SYN1P17600 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SYN1P17600 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYN1P17600 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.52■□□□□ 0.24
SYN1P17600 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SYN1P17600 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.52■□□□□ 0.24
SYN1P17600 MIR5196-201ENST00000578146 115 ntBASIC16.52■□□□□ 0.24
SYN1P17600 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.52■□□□□ 0.24
SYN1P17600 AC107464.3-201ENST00000609172 737 ntBASIC16.52■□□□□ 0.24
SYN1P17600 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.52■□□□□ 0.24
SYN1P17600 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SYN1P17600 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYN1P17600 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SYN1P17600 KRT8P21-201ENST00000430398 1491 ntBASIC16.52■□□□□ 0.23
SYN1P17600 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYN1P17600 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.52■□□□□ 0.23
SYN1P17600 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYN1P17600 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SYN1P17600 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SYN1P17600 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SYN1P17600 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 AC009093.2-202ENST00000620513 2079 ntBASIC16.51■□□□□ 0.23
SYN1P17600 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.51■□□□□ 0.23
SYN1P17600 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.51■□□□□ 0.23
SYN1P17600 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.51■□□□□ 0.23
SYN1P17600 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.51■□□□□ 0.23
SYN1P17600 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.51■□□□□ 0.23
SYN1P17600 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SYN1P17600 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.51■□□□□ 0.23
SYN1P17600 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SYN1P17600 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.51■□□□□ 0.23
SYN1P17600 AP000593.2-201ENST00000542775 1433 ntBASIC16.51■□□□□ 0.23
SYN1P17600 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.51■□□□□ 0.23
SYN1P17600 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.51■□□□□ 0.23
SYN1P17600 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.51■□□□□ 0.23
SYN1P17600 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.51■□□□□ 0.23
SYN1P17600 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SYN1P17600 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.5■□□□□ 0.23
SYN1P17600 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.5■□□□□ 0.23
SYN1P17600 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SYN1P17600 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.5■□□□□ 0.23
SYN1P17600 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 AC136759.1-202ENST00000530858 2194 ntBASIC16.5■□□□□ 0.23
SYN1P17600 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SYN1P17600 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SYN1P17600 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.5■□□□□ 0.23
SYN1P17600 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC16.5■□□□□ 0.23
SYN1P17600 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.5■□□□□ 0.23
SYN1P17600 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SYN1P17600 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.5■□□□□ 0.23
SYN1P17600 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.5■□□□□ 0.23
SYN1P17600 MIR4522-201ENST00000584932 87 ntBASIC16.5■□□□□ 0.23
SYN1P17600 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC16.5■□□□□ 0.23
SYN1P17600 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.5■□□□□ 0.23
SYN1P17600 AC006158.1-201ENST00000610661 249 ntBASIC16.5■□□□□ 0.23
SYN1P17600 MEG3_2.1-201ENST00000611456 105 ntBASIC16.5■□□□□ 0.23
SYN1P17600 MIR6769A-201ENST00000617340 73 ntBASIC16.5■□□□□ 0.23
SYN1P17600 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SYN1P17600 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms