Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 AC132938.4-201ENST00000623835 848 ntBASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40ALP0C0E4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 KRT8P35-201ENST00000483942 1338 ntBASIC14.52□□□□□ -0.08
RAB40ALP0C0E4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 AC114812.1-204ENST00000449669 728 ntBASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 FAM8A2P-201ENST00000528813 1142 ntBASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 AC010328.2-201ENST00000597698 1111 ntBASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 AC006058.4-201ENST00000624016 1670 ntBASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40ALP0C0E4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 FLJ16779-201ENST00000612722 7638 ntBASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 AP005117.1-202ENST00000581724 1908 ntBASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 DBET-201ENST00000630918 3363 ntBASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 AC006001.1-201ENST00000325130 474 ntBASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 AC026954.1-201ENST00000429771 1293 ntBASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 MIR4538-201ENST00000581377 78 ntBASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.51□□□□□ -0.09
RAB40ALP0C0E4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms