Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
CXCL13O43927 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CXCL13O43927 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CXCL13O43927 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.78□□□□□ -0.2
CXCL13O43927 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.78□□□□□ -0.2
CXCL13O43927 AC007787.1-201ENST00000588095 1583 ntBASIC13.78□□□□□ -0.2
CXCL13O43927 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.78□□□□□ -0.2
CXCL13O43927 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.78□□□□□ -0.2
CXCL13O43927 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.78□□□□□ -0.2
CXCL13O43927 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CXCL13O43927 PPT1-215ENST00000641471 2368 ntBASIC13.78□□□□□ -0.2
CXCL13O43927 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
CXCL13O43927 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CXCL13O43927 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.78□□□□□ -0.2
CXCL13O43927 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
CXCL13O43927 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CXCL13O43927 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CXCL13O43927 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CXCL13O43927 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.77□□□□□ -0.2
CXCL13O43927 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CXCL13O43927 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CXCL13O43927 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
CXCL13O43927 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CXCL13O43927 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CXCL13O43927 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CXCL13O43927 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CXCL13O43927 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
CXCL13O43927 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.77□□□□□ -0.21
CXCL13O43927 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.77□□□□□ -0.21
CXCL13O43927 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.77□□□□□ -0.21
CXCL13O43927 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.77□□□□□ -0.21
CXCL13O43927 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.77□□□□□ -0.21
CXCL13O43927 AC073347.1-201ENST00000421633 2643 ntBASIC13.77□□□□□ -0.21
CXCL13O43927 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.77□□□□□ -0.21
CXCL13O43927 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.77□□□□□ -0.21
CXCL13O43927 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.77□□□□□ -0.21
CXCL13O43927 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CXCL13O43927 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CXCL13O43927 AC068587.3-201ENST00000526613 355 ntBASIC13.77□□□□□ -0.21
CXCL13O43927 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CXCL13O43927 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.77□□□□□ -0.21
CXCL13O43927 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.77□□□□□ -0.21
CXCL13O43927 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.77□□□□□ -0.21
CXCL13O43927 AC148477.4-201ENST00000613430 1793 ntBASIC13.77□□□□□ -0.21
CXCL13O43927 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CXCL13O43927 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CXCL13O43927 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CXCL13O43927 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CXCL13O43927 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CXCL13O43927 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
CXCL13O43927 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.76□□□□□ -0.21
CXCL13O43927 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCL13O43927 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCL13O43927 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCL13O43927 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CXCL13O43927 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CXCL13O43927 MSTO2P-201ENST00000314835 1709 ntBASIC13.76□□□□□ -0.21
CXCL13O43927 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CXCL13O43927 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CXCL13O43927 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.76□□□□□ -0.21
CXCL13O43927 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 AC134312.5-201ENST00000568031 1313 ntBASIC13.76□□□□□ -0.21
CXCL13O43927 AC093525.8-201ENST00000624099 1342 ntBASIC13.76□□□□□ -0.21
CXCL13O43927 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL13O43927 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms