Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP2AO43633 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP2AO43633 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP2AO43633 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP2AO43633 RNU1-114P-201ENST00000365297 166 ntBASIC17.3■□□□□ 0.36
CHMP2AO43633 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP2AO43633 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP2AO43633 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHMP2AO43633 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP2AO43633 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP2AO43633 GPR53P-205ENST00000457298 1084 ntBASIC17.3■□□□□ 0.36
CHMP2AO43633 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CHMP2AO43633 AC106760.1-201ENST00000508690 800 ntBASIC17.3■□□□□ 0.36
CHMP2AO43633 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.3■□□□□ 0.36
CHMP2AO43633 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP2AO43633 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP2AO43633 BTNL10-201ENST00000595971 695 ntBASIC17.3■□□□□ 0.36
CHMP2AO43633 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP2AO43633 AC233724.13-201ENST00000598383 410 ntBASIC17.3■□□□□ 0.36
CHMP2AO43633 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP2AO43633 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP2AO43633 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP2AO43633 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CHMP2AO43633 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHMP2AO43633 LINC00554-201ENST00000564841 3011 ntBASIC17.3■□□□□ 0.36
CHMP2AO43633 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP2AO43633 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP2AO43633 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP2AO43633 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP2AO43633 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP2AO43633 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP2AO43633 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP2AO43633 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHMP2AO43633 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP2AO43633 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.29■□□□□ 0.36
CHMP2AO43633 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CHMP2AO43633 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 AC007787.1-201ENST00000588095 1583 ntBASIC17.29■□□□□ 0.36
CHMP2AO43633 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CHMP2AO43633 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHMP2AO43633 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP2AO43633 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CHMP2AO43633 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 OR8S1-201ENST00000310194 1080 ntBASIC17.29■□□□□ 0.36
CHMP2AO43633 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHMP2AO43633 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CHMP2AO43633 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.29■□□□□ 0.36
CHMP2AO43633 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP2AO43633 BAATP1-201ENST00000412284 1225 ntBASIC17.29■□□□□ 0.36
CHMP2AO43633 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHMP2AO43633 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.29■□□□□ 0.36
CHMP2AO43633 AC004066.1-201ENST00000502488 802 ntBASIC17.29■□□□□ 0.36
CHMP2AO43633 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.29■□□□□ 0.36
CHMP2AO43633 AP001889.1-201ENST00000525414 633 ntBASIC17.29■□□□□ 0.36
CHMP2AO43633 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP2AO43633 RAB43P1-201ENST00000561790 589 ntBASIC17.29■□□□□ 0.36
CHMP2AO43633 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP2AO43633 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CHMP2AO43633 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.29■□□□□ 0.36
CHMP2AO43633 AL162274.1-201ENST00000617191 1098 ntBASIC17.29■□□□□ 0.36
CHMP2AO43633 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.29■□□□□ 0.36
CHMP2AO43633 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP2AO43633 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP2AO43633 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP2AO43633 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHMP2AO43633 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CHMP2AO43633 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP2AO43633 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CHMP2AO43633 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP2AO43633 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.29■□□□□ 0.36
CHMP2AO43633 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP2AO43633 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP2AO43633 AL158070.2-201ENST00000623713 1621 ntBASIC17.29■□□□□ 0.36
CHMP2AO43633 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP2AO43633 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP2AO43633 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMP2AO43633 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHMP2AO43633 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP2AO43633 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHMP2AO43633 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP2AO43633 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP2AO43633 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CHMP2AO43633 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP2AO43633 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms