Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TO15178 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TO15178 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.2□□□□□ -0.14
TO15178 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 AP006294.1-201ENST00000415407 339 ntBASIC14.2□□□□□ -0.14
TO15178 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.2□□□□□ -0.14
TO15178 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.2□□□□□ -0.14
TO15178 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.2□□□□□ -0.14
TO15178 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
TO15178 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.2□□□□□ -0.14
TO15178 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.2□□□□□ -0.14
TO15178 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.2□□□□□ -0.14
TO15178 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.2□□□□□ -0.14
TO15178 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.2□□□□□ -0.14
TO15178 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.2□□□□□ -0.14
TO15178 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.2□□□□□ -0.14
TO15178 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.2□□□□□ -0.14
TO15178 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TO15178 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.2□□□□□ -0.14
TO15178 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
TO15178 AL033527.5-201ENST00000641382 801 ntBASIC14.2□□□□□ -0.14
TO15178 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.2□□□□□ -0.14
TO15178 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.2□□□□□ -0.14
TO15178 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.2□□□□□ -0.14
TO15178 WASH3P-207ENST00000560956 1394 ntBASIC14.2□□□□□ -0.14
TO15178 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TO15178 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TO15178 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TO15178 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 AC012508.2-201ENST00000567613 1472 ntBASIC14.19□□□□□ -0.14
TO15178 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.19□□□□□ -0.14
TO15178 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
TO15178 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.19□□□□□ -0.14
TO15178 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.19□□□□□ -0.14
TO15178 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TO15178 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
TO15178 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TO15178 AL035633.1-201ENST00000406139 838 ntBASIC14.19□□□□□ -0.14
TO15178 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 COX20P2-201ENST00000452636 358 ntBASIC14.19□□□□□ -0.14
TO15178 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TO15178 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.19□□□□□ -0.14
TO15178 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.19□□□□□ -0.14
TO15178 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.19□□□□□ -0.14
TO15178 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.19□□□□□ -0.14
TO15178 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.19□□□□□ -0.14
TO15178 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.19□□□□□ -0.14
TO15178 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.19□□□□□ -0.14
TO15178 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.19□□□□□ -0.14
TO15178 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.19□□□□□ -0.14
TO15178 PRSS30P-206ENST00000641773 873 ntBASIC14.19□□□□□ -0.14
TO15178 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.19□□□□□ -0.14
TO15178 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
TO15178 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.19□□□□□ -0.14
TO15178 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.19□□□□□ -0.14
TO15178 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TO15178 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.19□□□□□ -0.14
TO15178 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TO15178 AP002414.2-201ENST00000591780 3365 ntBASIC14.19□□□□□ -0.14
TO15178 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.18□□□□□ -0.14
TO15178 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.18□□□□□ -0.14
TO15178 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms