Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 AC144522.1-201ENST00000625111 1658 ntBASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 ME2P1-201ENST00000426028 1970 ntBASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 MIR5001-201ENST00000580185 100 ntBASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 AC012073.1-201ENST00000606114 1108 ntBASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 AC106820.2-201ENST00000563775 3264 ntBASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 AC084364.1-201ENST00000551967 1556 ntBASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM88BA6NKF7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 AC004522.1-201ENST00000419978 654 ntBASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 PGAM1P12-201ENST00000505622 748 ntBASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 RNA5SP417-201ENST00000516459 108 ntBASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms