Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
RTN4Q9NQC3 TOP3BP1-201ENST00000420768 1380 ntBASIC18.42■□□□□ 0.54
RTN4Q9NQC3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 C18orf15-201ENST00000623680 2534 ntBASIC18.42■□□□□ 0.54
RTN4Q9NQC3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 FAM220BP-201ENST00000377689 816 ntBASIC18.42■□□□□ 0.54
RTN4Q9NQC3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 KRT8P2-201ENST00000556193 944 ntBASIC18.42■□□□□ 0.54
RTN4Q9NQC3 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 AC099336.1-202ENST00000602961 463 ntBASIC18.42■□□□□ 0.54
RTN4Q9NQC3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 AL512652.2-201ENST00000625156 1716 ntBASIC18.42■□□□□ 0.54
RTN4Q9NQC3 MAPT-IT1-201ENST00000624111 3016 ntBASIC18.42■□□□□ 0.54
RTN4Q9NQC3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTN4Q9NQC3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 BX005266.1-201ENST00000473402 457 ntBASIC18.41■□□□□ 0.54
RTN4Q9NQC3 KRT18P21-201ENST00000515767 1272 ntBASIC18.41■□□□□ 0.54
RTN4Q9NQC3 AP001269.4-201ENST00000609611 512 ntBASIC18.41■□□□□ 0.54
RTN4Q9NQC3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 AC103798.2-201ENST00000624292 632 ntBASIC18.41■□□□□ 0.54
RTN4Q9NQC3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.41■□□□□ 0.54
RTN4Q9NQC3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 ZNF277-203ENST00000421043 2218 ntTSL 2 BASIC18.41■□□□□ 0.54
RTN4Q9NQC3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms