Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.55□□□□□ -0.24
TMEM54Q969K7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.55□□□□□ -0.24
TMEM54Q969K7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.55□□□□□ -0.24
TMEM54Q969K7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.55□□□□□ -0.24
TMEM54Q969K7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TMEM54Q969K7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 AL158070.2-201ENST00000623713 1621 ntBASIC13.55□□□□□ -0.24
TMEM54Q969K7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 NUS1P3-201ENST00000423502 862 ntBASIC13.55□□□□□ -0.24
TMEM54Q969K7 ELK1P1-201ENST00000485699 580 ntBASIC13.55□□□□□ -0.24
TMEM54Q969K7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.55□□□□□ -0.24
TMEM54Q969K7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.55□□□□□ -0.24
TMEM54Q969K7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.55□□□□□ -0.24
TMEM54Q969K7 AC190387.1-201ENST00000551683 408 ntBASIC13.55□□□□□ -0.24
TMEM54Q969K7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.55□□□□□ -0.24
TMEM54Q969K7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.55□□□□□ -0.24
TMEM54Q969K7 AC140912.1-201ENST00000577171 1054 ntBASIC13.55□□□□□ -0.24
TMEM54Q969K7 AC008494.3-201ENST00000606615 944 ntBASIC13.55□□□□□ -0.24
TMEM54Q969K7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.55□□□□□ -0.24
TMEM54Q969K7 BX539320.1-201ENST00000623759 877 ntBASIC13.55□□□□□ -0.24
TMEM54Q969K7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.55□□□□□ -0.24
TMEM54Q969K7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.55□□□□□ -0.24
TMEM54Q969K7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM54Q969K7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.55□□□□□ -0.24
TMEM54Q969K7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TMEM54Q969K7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.55□□□□□ -0.24
TMEM54Q969K7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 SOCS2P1-201ENST00000417727 557 ntBASIC13.54□□□□□ -0.24
TMEM54Q969K7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.54□□□□□ -0.24
TMEM54Q969K7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 TP53TG3HP-202ENST00000569755 579 ntBASIC13.54□□□□□ -0.24
TMEM54Q969K7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 AC133539.2-201ENST00000604757 467 ntBASIC13.54□□□□□ -0.24
TMEM54Q969K7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 PRSS30P-206ENST00000641773 873 ntBASIC13.54□□□□□ -0.24
TMEM54Q969K7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 LILRP1-201ENST00000444199 1370 ntBASIC13.54□□□□□ -0.24
TMEM54Q969K7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 TSPY26P-202ENST00000565928 3884 ntBASIC13.54□□□□□ -0.24
TMEM54Q969K7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM54Q969K7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM54Q969K7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM54Q969K7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM54Q969K7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM54Q969K7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM54Q969K7 AL359258.3-201ENST00000622910 2331 ntBASIC13.53□□□□□ -0.24
TMEM54Q969K7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM54Q969K7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms