Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 AC092127.1-201ENST00000567093 3455 ntBASIC18.79■□□□□ 0.6
RPGRQ92834 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.79■□□□□ 0.6
RPGRQ92834 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
RPGRQ92834 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RPGRQ92834 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.79■□□□□ 0.6
RPGRQ92834 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.79■□□□□ 0.6
RPGRQ92834 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.79■□□□□ 0.6
RPGRQ92834 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC18.79■□□□□ 0.6
RPGRQ92834 AC024681.1-201ENST00000521917 487 ntBASIC18.79■□□□□ 0.6
RPGRQ92834 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.79■□□□□ 0.6
RPGRQ92834 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.79■□□□□ 0.6
RPGRQ92834 MIR4683-201ENST00000579659 81 ntBASIC18.79■□□□□ 0.6
RPGRQ92834 RN7SL163P-201ENST00000583100 276 ntBASIC18.79■□□□□ 0.6
RPGRQ92834 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.79■□□□□ 0.6
RPGRQ92834 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18.79■□□□□ 0.6
RPGRQ92834 AC004923.1-202ENST00000642106 209 ntBASIC18.79■□□□□ 0.6
RPGRQ92834 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RPGRQ92834 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RPGRQ92834 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.79■□□□□ 0.6
RPGRQ92834 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.79■□□□□ 0.6
RPGRQ92834 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPGRQ92834 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RPGRQ92834 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RPGRQ92834 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RPGRQ92834 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.78■□□□□ 0.6
RPGRQ92834 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.78■□□□□ 0.6
RPGRQ92834 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.78■□□□□ 0.6
RPGRQ92834 ACTG1P2-201ENST00000415776 1125 ntBASIC18.78■□□□□ 0.6
RPGRQ92834 ACTG1P11-201ENST00000425411 1125 ntBASIC18.78■□□□□ 0.6
RPGRQ92834 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.78■□□□□ 0.6
RPGRQ92834 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.78■□□□□ 0.6
RPGRQ92834 TUBB8P8-201ENST00000458717 1058 ntBASIC18.78■□□□□ 0.6
RPGRQ92834 NUP210P1-202ENST00000504322 710 ntBASIC18.78■□□□□ 0.6
RPGRQ92834 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.78■□□□□ 0.6
RPGRQ92834 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC18.78■□□□□ 0.6
RPGRQ92834 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18.78■□□□□ 0.6
RPGRQ92834 MIR3907-201ENST00000579424 151 ntBASIC18.78■□□□□ 0.6
RPGRQ92834 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.78■□□□□ 0.6
RPGRQ92834 AL136301.1-201ENST00000615830 422 ntBASIC18.78■□□□□ 0.6
RPGRQ92834 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.78■□□□□ 0.6
RPGRQ92834 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RPGRQ92834 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.78■□□□□ 0.6
RPGRQ92834 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.78■□□□□ 0.6
RPGRQ92834 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC18.78■□□□□ 0.6
RPGRQ92834 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPGRQ92834 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.77■□□□□ 0.6
RPGRQ92834 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 TNRC18P3-201ENST00000441896 2691 ntBASIC18.77■□□□□ 0.6
RPGRQ92834 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RPGRQ92834 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
RPGRQ92834 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.77■□□□□ 0.6
RPGRQ92834 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RPGRQ92834 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms