Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 ELK1P1-201ENST00000485699 580 ntBASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 WASH4P-201ENST00000564273 1246 ntBASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 AC120045.2-201ENST00000567334 178 ntBASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 AC027307.3-201ENST00000594262 1100 ntBASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 AC093813.1-201ENST00000605066 256 ntBASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC148Q8NFR7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 AC104457.1-201ENST00000401024 814 ntBASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 CICP11-201ENST00000434745 2827 ntBASIC17.77■□□□□ 0.44
CCDC148Q8NFR7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.77■□□□□ 0.43
CCDC148Q8NFR7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CCDC148Q8NFR7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC148Q8NFR7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC148Q8NFR7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.77■□□□□ 0.43
CCDC148Q8NFR7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.77■□□□□ 0.43
CCDC148Q8NFR7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CCDC148Q8NFR7 AC023024.2-201ENST00000623561 1993 ntBASIC17.77■□□□□ 0.43
CCDC148Q8NFR7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
CCDC148Q8NFR7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC148Q8NFR7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CCDC148Q8NFR7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CCDC148Q8NFR7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 C1QBPP1-201ENST00000400117 770 ntBASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 SOCS2P1-201ENST00000417727 557 ntBASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 AC004066.1-201ENST00000502488 802 ntBASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC148Q8NFR7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms