Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 AL158070.2-201ENST00000623713 1621 ntBASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 SERBP1P2-201ENST00000436888 1164 ntBASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 AC107464.3-201ENST00000609172 737 ntBASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 AL136295.7-201ENST00000619226 1200 ntBASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 PRAL-201ENST00000624952 3286 ntBASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 AC106820.3-201ENST00000561653 397 ntBASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 AC018695.6-201ENST00000614011 534 ntBASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 AC244250.3-201ENST00000620749 366 ntBASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 GCSHP3-201ENST00000431120 391 ntBASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC168Q8NDH2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms