Protein–RNA interactions for Protein: Q8N1F7

NUP93, Nuclear pore complex protein Nup93, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93Q8N1F7 BX539320.1-201ENST00000623759 877 ntBASIC16.25■□□□□ 0.19
NUP93Q8N1F7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.25■□□□□ 0.19
NUP93Q8N1F7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 AC134312.5-201ENST00000568031 1313 ntBASIC16.24■□□□□ 0.19
NUP93Q8N1F7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 AC005229.1-201ENST00000392885 409 ntBASIC16.24■□□□□ 0.19
NUP93Q8N1F7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 AC012441.1-201ENST00000446669 685 ntBASIC16.24■□□□□ 0.19
NUP93Q8N1F7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 AL359881.2-201ENST00000602973 570 ntBASIC16.24■□□□□ 0.19
NUP93Q8N1F7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.24■□□□□ 0.19
NUP93Q8N1F7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
NUP93Q8N1F7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 MSTO2P-201ENST00000314835 1709 ntBASIC16.23■□□□□ 0.19
NUP93Q8N1F7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 AC234783.1-201ENST00000441761 496 ntBASIC16.23■□□□□ 0.19
NUP93Q8N1F7 AL355864.2-201ENST00000447420 863 ntBASIC16.23■□□□□ 0.19
NUP93Q8N1F7 BCRP2-202ENST00000447763 634 ntBASIC16.23■□□□□ 0.19
NUP93Q8N1F7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.23■□□□□ 0.19
NUP93Q8N1F7 AC022137.2-201ENST00000503482 481 ntBASIC16.23■□□□□ 0.19
NUP93Q8N1F7 BCRP6-201ENST00000510112 632 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms