Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 AL118508.1-201ENST00000613502 2345 ntBASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 AC239868.1-201ENST00000369385 493 ntBASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 HPGD-203ENST00000422112 805 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 AC006158.1-201ENST00000610661 249 ntBASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC9.27□□□□□ -0.93
VPS13BQ7Z7G8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 AL627231.1-201ENST00000394467 1125 ntBASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 HNRNPA1P41-201ENST00000397777 928 ntBASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 FKBP4P6-201ENST00000457486 1332 ntBASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 REEP5-205ENST00000504247 480 ntTSL 5 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 AC242376.2-201ENST00000619355 883 ntBASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13BQ7Z7G8 KRT8P29-201ENST00000420409 1371 ntBASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms