Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRPFP62306 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SNRPFP62306 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.69■□□□□ 0.26
SNRPFP62306 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.69■□□□□ 0.26
SNRPFP62306 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRPFP62306 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRPFP62306 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.68■□□□□ 0.26
SNRPFP62306 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SNRPFP62306 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
SNRPFP62306 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.68■□□□□ 0.26
SNRPFP62306 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.68■□□□□ 0.26
SNRPFP62306 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SNRPFP62306 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SNRPFP62306 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.68■□□□□ 0.26
SNRPFP62306 ACTG1P3-201ENST00000431775 1114 ntBASIC16.68■□□□□ 0.26
SNRPFP62306 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.68■□□□□ 0.26
SNRPFP62306 AC022137.2-201ENST00000503482 481 ntBASIC16.68■□□□□ 0.26
SNRPFP62306 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.68■□□□□ 0.26
SNRPFP62306 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SNRPFP62306 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SNRPFP62306 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SNRPFP62306 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.68■□□□□ 0.26
SNRPFP62306 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.68■□□□□ 0.26
SNRPFP62306 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.68■□□□□ 0.26
SNRPFP62306 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.68■□□□□ 0.26
SNRPFP62306 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.68■□□□□ 0.26
SNRPFP62306 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.68■□□□□ 0.26
SNRPFP62306 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.68■□□□□ 0.26
SNRPFP62306 AC025048.6-201ENST00000634326 1161 ntBASIC16.68■□□□□ 0.26
SNRPFP62306 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SNRPFP62306 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.68■□□□□ 0.26
SNRPFP62306 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.68■□□□□ 0.26
SNRPFP62306 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SNRPFP62306 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SNRPFP62306 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNRPFP62306 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SNRPFP62306 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SNRPFP62306 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SNRPFP62306 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SNRPFP62306 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.67■□□□□ 0.26
SNRPFP62306 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 ACTBP8-201ENST00000403258 1108 ntBASIC16.67■□□□□ 0.26
SNRPFP62306 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 KLF2P2-201ENST00000416807 1039 ntBASIC16.67■□□□□ 0.26
SNRPFP62306 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SNRPFP62306 GIMAP3P-201ENST00000495150 836 ntBASIC16.67■□□□□ 0.26
SNRPFP62306 AC011495.1-201ENST00000498085 584 ntBASIC16.67■□□□□ 0.26
SNRPFP62306 KRT18P25-201ENST00000508931 1278 ntBASIC16.67■□□□□ 0.26
SNRPFP62306 AC022616.1-201ENST00000518688 554 ntBASIC16.67■□□□□ 0.26
SNRPFP62306 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.67■□□□□ 0.26
SNRPFP62306 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SNRPFP62306 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SNRPFP62306 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.67■□□□□ 0.26
SNRPFP62306 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.67■□□□□ 0.26
SNRPFP62306 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.67■□□□□ 0.26
SNRPFP62306 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
SNRPFP62306 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRPFP62306 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 260.1 ms