Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.91■□□□□ 0.3
CPT1AP50416 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 FKBP4P6-201ENST00000457486 1332 ntBASIC16.91■□□□□ 0.3
CPT1AP50416 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.91■□□□□ 0.3
CPT1AP50416 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.91■□□□□ 0.3
CPT1AP50416 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CPT1AP50416 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.9■□□□□ 0.3
CPT1AP50416 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.9■□□□□ 0.3
CPT1AP50416 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.9■□□□□ 0.3
CPT1AP50416 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.9■□□□□ 0.3
CPT1AP50416 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPT1AP50416 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPT1AP50416 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPT1AP50416 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.9■□□□□ 0.3
CPT1AP50416 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CPT1AP50416 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPT1AP50416 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.9■□□□□ 0.3
CPT1AP50416 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPT1AP50416 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
CPT1AP50416 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPT1AP50416 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.9■□□□□ 0.3
CPT1AP50416 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CPT1AP50416 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPT1AP50416 AL133466.1-201ENST00000447582 150 ntBASIC16.9■□□□□ 0.3
CPT1AP50416 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.9■□□□□ 0.3
CPT1AP50416 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.9■□□□□ 0.3
CPT1AP50416 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.9■□□□□ 0.3
CPT1AP50416 AC026434.2-201ENST00000506094 1078 ntBASIC16.9■□□□□ 0.3
CPT1AP50416 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.9■□□□□ 0.3
CPT1AP50416 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.9■□□□□ 0.3
CPT1AP50416 AP001505.2-201ENST00000616815 443 ntBASIC16.9■□□□□ 0.3
CPT1AP50416 AC091812.3-201ENST00000621362 345 ntBASIC16.9■□□□□ 0.3
CPT1AP50416 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPT1AP50416 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPT1AP50416 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPT1AP50416 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPT1AP50416 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CPT1AP50416 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPT1AP50416 AL360270.3-201ENST00000609118 1348 ntBASIC16.9■□□□□ 0.3
CPT1AP50416 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPT1AP50416 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CPT1AP50416 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPT1AP50416 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPT1AP50416 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPT1AP50416 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPT1AP50416 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPT1AP50416 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CPT1AP50416 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CPT1AP50416 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CPT1AP50416 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPT1AP50416 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.89■□□□□ 0.29
CPT1AP50416 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPT1AP50416 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPT1AP50416 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPT1AP50416 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CPT1AP50416 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.89■□□□□ 0.29
CPT1AP50416 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CPT1AP50416 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.89■□□□□ 0.29
CPT1AP50416 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.89■□□□□ 0.29
CPT1AP50416 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPT1AP50416 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPT1AP50416 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.89■□□□□ 0.29
CPT1AP50416 AC011742.3-201ENST00000439053 820 ntBASIC16.89■□□□□ 0.29
CPT1AP50416 SPTLC1P5-201ENST00000450718 252 ntBASIC16.89■□□□□ 0.29
CPT1AP50416 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.89■□□□□ 0.29
CPT1AP50416 AC245884.6-201ENST00000515672 1067 ntBASIC16.89■□□□□ 0.29
CPT1AP50416 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.89■□□□□ 0.29
CPT1AP50416 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.89■□□□□ 0.29
CPT1AP50416 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.89■□□□□ 0.29
CPT1AP50416 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
CPT1AP50416 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.89■□□□□ 0.29
CPT1AP50416 AC091544.8-201ENST00000619490 361 ntBASIC16.89■□□□□ 0.29
CPT1AP50416 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CPT1AP50416 AC022748.3-201ENST00000621828 275 ntBASIC16.89■□□□□ 0.29
CPT1AP50416 AC100757.4-201ENST00000626934 759 ntBASIC16.89■□□□□ 0.29
CPT1AP50416 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPT1AP50416 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPT1AP50416 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPT1AP50416 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.89■□□□□ 0.29
CPT1AP50416 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPT1AP50416 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPT1AP50416 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.89■□□□□ 0.29
CPT1AP50416 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPT1AP50416 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CPT1AP50416 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPT1AP50416 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.88■□□□□ 0.29
CPT1AP50416 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPT1AP50416 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.88■□□□□ 0.29
CPT1AP50416 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.88■□□□□ 0.29
CPT1AP50416 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPT1AP50416 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.88■□□□□ 0.29
CPT1AP50416 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CPT1AP50416 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPT1AP50416 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.88■□□□□ 0.29
CPT1AP50416 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms