Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 CU633904.3-201ENST00000624042 1029 ntBASIC16.95■□□□□ 0.3
SMPD1P17405 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMPD1P17405 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.95■□□□□ 0.3
SMPD1P17405 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMPD1P17405 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.95■□□□□ 0.3
SMPD1P17405 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.95■□□□□ 0.3
SMPD1P17405 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMPD1P17405 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMPD1P17405 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.95■□□□□ 0.3
SMPD1P17405 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SMPD1P17405 AL137783.1-201ENST00000623494 1896 ntBASIC16.95■□□□□ 0.3
SMPD1P17405 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMPD1P17405 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SMPD1P17405 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.94■□□□□ 0.3
SMPD1P17405 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SMPD1P17405 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.94■□□□□ 0.3
SMPD1P17405 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 AC091046.1-201ENST00000331871 207 ntBASIC16.94■□□□□ 0.3
SMPD1P17405 GHSR-202ENST00000427970 912 ntBASIC16.94■□□□□ 0.3
SMPD1P17405 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 RN7SL11P-201ENST00000471305 293 ntBASIC16.94■□□□□ 0.3
SMPD1P17405 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.94■□□□□ 0.3
SMPD1P17405 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.94■□□□□ 0.3
SMPD1P17405 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.94■□□□□ 0.3
SMPD1P17405 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.94■□□□□ 0.3
SMPD1P17405 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.94■□□□□ 0.3
SMPD1P17405 AL162426.1-201ENST00000624141 743 ntBASIC16.94■□□□□ 0.3
SMPD1P17405 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 AL359258.3-201ENST00000622910 2331 ntBASIC16.94■□□□□ 0.3
SMPD1P17405 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SMPD1P17405 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.94■□□□□ 0.3
SMPD1P17405 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 AP005117.1-202ENST00000581724 1908 ntBASIC16.94■□□□□ 0.3
SMPD1P17405 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SMPD1P17405 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMPD1P17405 AC009093.2-202ENST00000620513 2079 ntBASIC16.93■□□□□ 0.3
SMPD1P17405 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
SMPD1P17405 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SMPD1P17405 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
SMPD1P17405 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SMPD1P17405 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.93■□□□□ 0.3
SMPD1P17405 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.93■□□□□ 0.3
SMPD1P17405 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SMPD1P17405 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.93■□□□□ 0.3
SMPD1P17405 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.93■□□□□ 0.3
SMPD1P17405 AL133466.1-201ENST00000447582 150 ntBASIC16.93■□□□□ 0.3
SMPD1P17405 AC104073.2-201ENST00000453737 312 ntBASIC16.93■□□□□ 0.3
SMPD1P17405 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 RN7SL720P-201ENST00000488178 304 ntBASIC16.93■□□□□ 0.3
SMPD1P17405 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.93■□□□□ 0.3
SMPD1P17405 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.93■□□□□ 0.3
SMPD1P17405 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.93■□□□□ 0.3
SMPD1P17405 AL136301.1-201ENST00000615830 422 ntBASIC16.93■□□□□ 0.3
SMPD1P17405 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
SMPD1P17405 AC091544.8-201ENST00000619490 361 ntBASIC16.93■□□□□ 0.3
SMPD1P17405 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.93■□□□□ 0.3
SMPD1P17405 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.93■□□□□ 0.3
SMPD1P17405 AC004923.1-202ENST00000642106 209 ntBASIC16.93■□□□□ 0.3
SMPD1P17405 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.93■□□□□ 0.3
SMPD1P17405 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SMPD1P17405 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.93■□□□□ 0.3
SMPD1P17405 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.93■□□□□ 0.3
SMPD1P17405 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMPD1P17405 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms