Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PDGFRAP16234 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 AC087499.6-201ENST00000411576 835 ntBASIC16.19■□□□□ 0.18
PDGFRAP16234 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.19■□□□□ 0.18
PDGFRAP16234 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.19■□□□□ 0.18
PDGFRAP16234 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 AC027307.3-201ENST00000594262 1100 ntBASIC16.19■□□□□ 0.18
PDGFRAP16234 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 AC025048.6-201ENST00000634326 1161 ntBASIC16.19■□□□□ 0.18
PDGFRAP16234 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.19■□□□□ 0.18
PDGFRAP16234 PCDHA3-202ENST00000532566 4594 ntBASIC16.19■□□□□ 0.18
PDGFRAP16234 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.19■□□□□ 0.18
PDGFRAP16234 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.19■□□□□ 0.18
PDGFRAP16234 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PDGFRAP16234 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PDGFRAP16234 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PDGFRAP16234 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 AL391825.1-201ENST00000457671 1364 ntBASIC16.18■□□□□ 0.18
PDGFRAP16234 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PDGFRAP16234 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.18■□□□□ 0.18
PDGFRAP16234 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PDGFRAP16234 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.18■□□□□ 0.18
PDGFRAP16234 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFRAP16234 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.18■□□□□ 0.18
PDGFRAP16234 RRP7BP-205ENST00000566851 833 ntBASIC16.18■□□□□ 0.18
PDGFRAP16234 TP53TG3HP-202ENST00000569755 579 ntBASIC16.18■□□□□ 0.18
PDGFRAP16234 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PDGFRAP16234 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PDGFRAP16234 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFRAP16234 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFRAP16234 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFRAP16234 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFRAP16234 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFRAP16234 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.18■□□□□ 0.18
PDGFRAP16234 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDGFRAP16234 TNRC18P2-201ENST00000417666 2714 ntBASIC16.18■□□□□ 0.18
PDGFRAP16234 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFRAP16234 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFRAP16234 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFRAP16234 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFRAP16234 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.17■□□□□ 0.18
PDGFRAP16234 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 WASH3P-207ENST00000560956 1394 ntBASIC16.17■□□□□ 0.18
PDGFRAP16234 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFRAP16234 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.17■□□□□ 0.18
PDGFRAP16234 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.17■□□□□ 0.18
PDGFRAP16234 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.17■□□□□ 0.18
PDGFRAP16234 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.17■□□□□ 0.18
PDGFRAP16234 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.17■□□□□ 0.18
PDGFRAP16234 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.17■□□□□ 0.18
PDGFRAP16234 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
PDGFRAP16234 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 AC008494.3-201ENST00000606615 944 ntBASIC16.17■□□□□ 0.18
PDGFRAP16234 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.17■□□□□ 0.18
PDGFRAP16234 AC007431.3-201ENST00000623221 587 ntBASIC16.17■□□□□ 0.18
PDGFRAP16234 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.17■□□□□ 0.18
PDGFRAP16234 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFRAP16234 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFRAP16234 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFRAP16234 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
PDGFRAP16234 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms