Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.11■□□□□ 0.49
TOP1P11387 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 OR8S1-201ENST00000310194 1080 ntBASIC18.11■□□□□ 0.49
TOP1P11387 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.11■□□□□ 0.49
TOP1P11387 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TOP1P11387 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.11■□□□□ 0.49
TOP1P11387 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.11■□□□□ 0.49
TOP1P11387 AC009486.1-201ENST00000569860 813 ntBASIC18.11■□□□□ 0.49
TOP1P11387 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.11■□□□□ 0.49
TOP1P11387 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.11■□□□□ 0.49
TOP1P11387 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TOP1P11387 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.11■□□□□ 0.49
TOP1P11387 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TOP1P11387 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
TOP1P11387 PPT1-215ENST00000641471 2368 ntBASIC18.11■□□□□ 0.49
TOP1P11387 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.11■□□□□ 0.49
TOP1P11387 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
TOP1P11387 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOP1P11387 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP1P11387 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP1P11387 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.1■□□□□ 0.49
TOP1P11387 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TOP1P11387 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP1P11387 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.1■□□□□ 0.49
TOP1P11387 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.1■□□□□ 0.49
TOP1P11387 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.1■□□□□ 0.49
TOP1P11387 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
TOP1P11387 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.1■□□□□ 0.49
TOP1P11387 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP1P11387 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TOP1P11387 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP1P11387 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP1P11387 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TOP1P11387 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP1P11387 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TOP1P11387 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TOP1P11387 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TOP1P11387 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP1P11387 AC079776.1-201ENST00000401540 1152 ntBASIC18.1■□□□□ 0.49
TOP1P11387 RPL5P21-201ENST00000404620 815 ntBASIC18.1■□□□□ 0.49
TOP1P11387 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.1■□□□□ 0.49
TOP1P11387 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.1■□□□□ 0.49
TOP1P11387 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.1■□□□□ 0.49
TOP1P11387 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.1■□□□□ 0.49
TOP1P11387 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.1■□□□□ 0.49
TOP1P11387 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.1■□□□□ 0.49
TOP1P11387 BTNL10-201ENST00000595971 695 ntBASIC18.1■□□□□ 0.49
TOP1P11387 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.1■□□□□ 0.49
TOP1P11387 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.1■□□□□ 0.49
TOP1P11387 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP1P11387 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
TOP1P11387 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
TOP1P11387 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.1■□□□□ 0.49
TOP1P11387 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.1■□□□□ 0.49
TOP1P11387 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TOP1P11387 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
TOP1P11387 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP1P11387 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOP1P11387 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TOP1P11387 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.09■□□□□ 0.49
TOP1P11387 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.09■□□□□ 0.49
TOP1P11387 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.09■□□□□ 0.49
TOP1P11387 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.09■□□□□ 0.49
TOP1P11387 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TOP1P11387 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.09■□□□□ 0.49
TOP1P11387 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.09■□□□□ 0.49
TOP1P11387 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.09■□□□□ 0.49
TOP1P11387 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 GPR53P-205ENST00000457298 1084 ntBASIC18.09■□□□□ 0.49
TOP1P11387 AC093433.1-201ENST00000458048 571 ntBASIC18.09■□□□□ 0.49
TOP1P11387 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.09■□□□□ 0.49
TOP1P11387 AP001582.1-201ENST00000525856 295 ntBASIC18.09■□□□□ 0.49
TOP1P11387 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.09■□□□□ 0.49
TOP1P11387 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
TOP1P11387 SLC25A47P1-201ENST00000531577 414 ntBASIC18.09■□□□□ 0.49
TOP1P11387 KRT17P8-201ENST00000540749 863 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms