Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 GNAQP1-201ENST00000444815 1067 ntBASIC18.18■□□□□ 0.5
HMGB1P09429 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGB1P09429 UGT1A2P-201ENST00000454886 866 ntBASIC18.18■□□□□ 0.5
HMGB1P09429 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGB1P09429 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGB1P09429 BRI3BPP1-201ENST00000594224 787 ntBASIC18.18■□□□□ 0.5
HMGB1P09429 AC093813.1-201ENST00000605066 256 ntBASIC18.18■□□□□ 0.5
HMGB1P09429 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HMGB1P09429 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGB1P09429 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGB1P09429 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
HMGB1P09429 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGB1P09429 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGB1P09429 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGB1P09429 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGB1P09429 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HMGB1P09429 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 AL391825.1-201ENST00000457671 1364 ntBASIC18.17■□□□□ 0.5
HMGB1P09429 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
HMGB1P09429 AC007787.1-201ENST00000588095 1583 ntBASIC18.17■□□□□ 0.5
HMGB1P09429 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGB1P09429 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HMGB1P09429 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGB1P09429 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HMGB1P09429 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HMGB1P09429 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HMGB1P09429 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
HMGB1P09429 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGB1P09429 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HMGB1P09429 DFFBP1-201ENST00000433250 979 ntBASIC18.17■□□□□ 0.5
HMGB1P09429 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.17■□□□□ 0.5
HMGB1P09429 FAM207CP-201ENST00000443486 507 ntBASIC18.17■□□□□ 0.5
HMGB1P09429 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGB1P09429 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGB1P09429 AC104596.2-201ENST00000512793 793 ntBASIC18.17■□□□□ 0.5
HMGB1P09429 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.17■□□□□ 0.5
HMGB1P09429 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HMGB1P09429 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.17■□□□□ 0.5
HMGB1P09429 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGB1P09429 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.17■□□□□ 0.5
HMGB1P09429 AL138799.1-201ENST00000448213 1675 ntBASIC18.17■□□□□ 0.5
HMGB1P09429 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGB1P09429 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGB1P09429 AJ011931.1-201ENST00000618749 2492 ntBASIC18.17■□□□□ 0.5
HMGB1P09429 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.17■□□□□ 0.5
HMGB1P09429 AC093525.8-201ENST00000624099 1342 ntBASIC18.17■□□□□ 0.5
HMGB1P09429 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGB1P09429 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 PKD1P5-201ENST00000532415 10291 ntBASIC18.17■□□□□ 0.5
HMGB1P09429 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HMGB1P09429 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGB1P09429 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HMGB1P09429 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HMGB1P09429 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HMGB1P09429 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGB1P09429 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HMGB1P09429 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGB1P09429 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HMGB1P09429 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGB1P09429 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
HMGB1P09429 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGB1P09429 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HMGB1P09429 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGB1P09429 AL353779.1-201ENST00000434793 351 ntBASIC18.16■□□□□ 0.5
HMGB1P09429 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 AC107373.2-201ENST00000607735 490 ntBASIC18.16■□□□□ 0.5
HMGB1P09429 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 PID1-202ENST00000392054 2745 ntTSL 2 BASIC18.16■□□□□ 0.5
HMGB1P09429 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGB1P09429 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HMGB1P09429 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms