Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.64□□□□□ -0.07
MT-ND1P03886 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
MT-ND1P03886 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.64□□□□□ -0.07
MT-ND1P03886 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.63□□□□□ -0.07
MT-ND1P03886 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.63□□□□□ -0.07
MT-ND1P03886 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.63□□□□□ -0.07
MT-ND1P03886 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
MT-ND1P03886 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
MT-ND1P03886 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.63□□□□□ -0.07
MT-ND1P03886 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.63□□□□□ -0.07
MT-ND1P03886 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.63□□□□□ -0.07
MT-ND1P03886 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.63□□□□□ -0.07
MT-ND1P03886 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.63□□□□□ -0.07
MT-ND1P03886 SPTSSB-204ENST00000617024 1292 ntBASIC14.63□□□□□ -0.07
MT-ND1P03886 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
MT-ND1P03886 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
MT-ND1P03886 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
MT-ND1P03886 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.63□□□□□ -0.07
MT-ND1P03886 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.63□□□□□ -0.07
MT-ND1P03886 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
MT-ND1P03886 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MT-ND1P03886 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.63□□□□□ -0.07
MT-ND1P03886 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
MT-ND1P03886 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.62□□□□□ -0.07
MT-ND1P03886 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.62□□□□□ -0.07
MT-ND1P03886 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
MT-ND1P03886 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.62□□□□□ -0.07
MT-ND1P03886 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.62□□□□□ -0.07
MT-ND1P03886 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
MT-ND1P03886 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
MT-ND1P03886 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.62□□□□□ -0.07
MT-ND1P03886 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
MT-ND1P03886 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 KRT8P37-201ENST00000451609 1420 ntBASIC14.62□□□□□ -0.07
MT-ND1P03886 PHKG1P2-201ENST00000457537 863 ntBASIC14.62□□□□□ -0.07
MT-ND1P03886 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.62□□□□□ -0.07
MT-ND1P03886 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.62□□□□□ -0.07
MT-ND1P03886 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.62□□□□□ -0.07
MT-ND1P03886 HNRNPUP1-201ENST00000554987 333 ntBASIC14.62□□□□□ -0.07
MT-ND1P03886 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.62□□□□□ -0.07
MT-ND1P03886 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.62□□□□□ -0.07
MT-ND1P03886 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.62□□□□□ -0.07
MT-ND1P03886 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
MT-ND1P03886 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
MT-ND1P03886 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
MT-ND1P03886 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
MT-ND1P03886 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
MT-ND1P03886 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
MT-ND1P03886 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.62□□□□□ -0.07
MT-ND1P03886 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MT-ND1P03886 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
MT-ND1P03886 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MT-ND1P03886 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MT-ND1P03886 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.61□□□□□ -0.07
MT-ND1P03886 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms