Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 HINT2P1-201ENST00000419438 481 ntBASIC18.26■□□□□ 0.51
COL1A1P02452 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
COL1A1P02452 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.26■□□□□ 0.51
COL1A1P02452 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.26■□□□□ 0.51
COL1A1P02452 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.26■□□□□ 0.51
COL1A1P02452 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
COL1A1P02452 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.25■□□□□ 0.51
COL1A1P02452 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL1A1P02452 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.25■□□□□ 0.51
COL1A1P02452 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL1A1P02452 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.25■□□□□ 0.51
COL1A1P02452 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
COL1A1P02452 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL1A1P02452 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 AC020910.5-201ENST00000623668 1865 ntBASIC18.25■□□□□ 0.51
COL1A1P02452 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL1A1P02452 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.25■□□□□ 0.51
COL1A1P02452 TMEM198B-204ENST00000484016 896 ntBASIC18.25■□□□□ 0.51
COL1A1P02452 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.25■□□□□ 0.51
COL1A1P02452 AC007663.3-201ENST00000609632 465 ntBASIC18.25■□□□□ 0.51
COL1A1P02452 AP001505.2-201ENST00000616815 443 ntBASIC18.25■□□□□ 0.51
COL1A1P02452 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.25■□□□□ 0.51
COL1A1P02452 AC023090.2-201ENST00000625182 2110 ntBASIC18.25■□□□□ 0.51
COL1A1P02452 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL1A1P02452 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.25■□□□□ 0.51
COL1A1P02452 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL1A1P02452 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.25■□□□□ 0.51
COL1A1P02452 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
COL1A1P02452 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.24■□□□□ 0.51
COL1A1P02452 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.24■□□□□ 0.51
COL1A1P02452 FKBP4P6-201ENST00000457486 1332 ntBASIC18.24■□□□□ 0.51
COL1A1P02452 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.24■□□□□ 0.51
COL1A1P02452 MIR769-201ENST00000390225 118 ntBASIC18.24■□□□□ 0.51
COL1A1P02452 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC18.24■□□□□ 0.51
COL1A1P02452 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.24■□□□□ 0.51
COL1A1P02452 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.24■□□□□ 0.51
COL1A1P02452 AC044849.1-201ENST00000519737 1188 ntBASIC18.24■□□□□ 0.51
COL1A1P02452 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.24■□□□□ 0.51
COL1A1P02452 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.24■□□□□ 0.51
COL1A1P02452 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.24■□□□□ 0.51
COL1A1P02452 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.24■□□□□ 0.51
COL1A1P02452 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
COL1A1P02452 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.24■□□□□ 0.51
COL1A1P02452 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.24■□□□□ 0.51
COL1A1P02452 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL1A1P02452 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL1A1P02452 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.23■□□□□ 0.51
COL1A1P02452 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 AC132872.4-202ENST00000622924 2756 ntBASIC18.23■□□□□ 0.51
COL1A1P02452 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 AL138725.1-201ENST00000407347 1314 ntBASIC18.23■□□□□ 0.51
COL1A1P02452 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.23■□□□□ 0.51
COL1A1P02452 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.23■□□□□ 0.51
COL1A1P02452 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.23■□□□□ 0.51
COL1A1P02452 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COL1A1P02452 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
COL1A1P02452 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL1A1P02452 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.23■□□□□ 0.51
COL1A1P02452 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
COL1A1P02452 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.23■□□□□ 0.51
COL1A1P02452 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms