Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ZNF254O75437 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ZNF254O75437 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.76□□□□□ -0.21
ZNF254O75437 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ZNF254O75437 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF254O75437 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ZNF254O75437 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ZNF254O75437 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 KRT18P32-201ENST00000424695 1287 ntBASIC13.76□□□□□ -0.21
ZNF254O75437 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF254O75437 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF254O75437 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF254O75437 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
ZNF254O75437 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF254O75437 AC005829.1-201ENST00000570002 483 ntBASIC13.76□□□□□ -0.21
ZNF254O75437 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.76□□□□□ -0.21
ZNF254O75437 AC022145.2-201ENST00000598203 171 ntBASIC13.76□□□□□ -0.21
ZNF254O75437 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF254O75437 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
ZNF254O75437 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF254O75437 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF254O75437 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZNF254O75437 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 AC084364.1-201ENST00000551967 1556 ntBASIC13.75□□□□□ -0.21
ZNF254O75437 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.75□□□□□ -0.21
ZNF254O75437 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.75□□□□□ -0.21
ZNF254O75437 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF254O75437 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF254O75437 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
ZNF254O75437 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF254O75437 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.75□□□□□ -0.21
ZNF254O75437 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.75□□□□□ -0.21
ZNF254O75437 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 MIR574-201ENST00000385209 96 ntBASIC13.75□□□□□ -0.21
ZNF254O75437 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF254O75437 DNAJB3-201ENST00000446806 729 ntBASIC13.75□□□□□ -0.21
ZNF254O75437 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.75□□□□□ -0.21
ZNF254O75437 CEND1P1-201ENST00000451006 455 ntBASIC13.75□□□□□ -0.21
ZNF254O75437 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF254O75437 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF254O75437 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.75□□□□□ -0.21
ZNF254O75437 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.75□□□□□ -0.21
ZNF254O75437 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.75□□□□□ -0.21
ZNF254O75437 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
ZNF254O75437 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.75□□□□□ -0.21
ZNF254O75437 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.75□□□□□ -0.21
ZNF254O75437 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF254O75437 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ZNF254O75437 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF254O75437 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms