Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.57■□□□□ 0.4
ATP2A1O14983 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.57■□□□□ 0.4
ATP2A1O14983 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP2A1O14983 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 AC010491.1-201ENST00000563101 2797 ntBASIC17.57■□□□□ 0.4
ATP2A1O14983 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP2A1O14983 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ATP2A1O14983 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP2A1O14983 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ATP2A1O14983 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP2A1O14983 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP2A1O14983 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP2A1O14983 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ATP2A1O14983 POM121L8P-201ENST00000417732 1281 ntBASIC17.56■□□□□ 0.4
ATP2A1O14983 POM121L9P-203ENST00000441984 1285 ntBASIC17.56■□□□□ 0.4
ATP2A1O14983 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 AC022616.1-201ENST00000518688 554 ntBASIC17.56■□□□□ 0.4
ATP2A1O14983 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP2A1O14983 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP2A1O14983 AL118558.3-201ENST00000607414 1079 ntBASIC17.56■□□□□ 0.4
ATP2A1O14983 AC005695.3-201ENST00000614522 232 ntBASIC17.56■□□□□ 0.4
ATP2A1O14983 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.56■□□□□ 0.4
ATP2A1O14983 AL008638.5-201ENST00000623814 1298 ntBASIC17.56■□□□□ 0.4
ATP2A1O14983 AL139099.5-201ENST00000635274 300 ntBASIC17.56■□□□□ 0.4
ATP2A1O14983 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.56■□□□□ 0.4
ATP2A1O14983 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ATP2A1O14983 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ATP2A1O14983 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 AL354989.2-201ENST00000435838 1540 ntBASIC17.56■□□□□ 0.4
ATP2A1O14983 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ATP2A1O14983 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ATP2A1O14983 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP2A1O14983 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP2A1O14983 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP2A1O14983 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
ATP2A1O14983 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.55■□□□□ 0.4
ATP2A1O14983 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.55■□□□□ 0.4
ATP2A1O14983 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.55■□□□□ 0.4
ATP2A1O14983 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.55■□□□□ 0.4
ATP2A1O14983 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.55■□□□□ 0.4
ATP2A1O14983 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.55■□□□□ 0.4
ATP2A1O14983 AC007969.1-201ENST00000433675 447 ntBASIC17.55■□□□□ 0.4
ATP2A1O14983 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.55■□□□□ 0.4
ATP2A1O14983 MTX1P1-201ENST00000440904 838 ntBASIC17.55■□□□□ 0.4
ATP2A1O14983 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.55■□□□□ 0.4
ATP2A1O14983 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
ATP2A1O14983 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.55■□□□□ 0.4
ATP2A1O14983 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ATP2A1O14983 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ATP2A1O14983 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.55■□□□□ 0.4
ATP2A1O14983 AL022328.3-201ENST00000607943 679 ntBASIC17.55■□□□□ 0.4
ATP2A1O14983 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ATP2A1O14983 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.55■□□□□ 0.4
ATP2A1O14983 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.55■□□□□ 0.4
ATP2A1O14983 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.55■□□□□ 0.4
ATP2A1O14983 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.55■□□□□ 0.4
ATP2A1O14983 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ATP2A1O14983 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP2A1O14983 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A1O14983 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms