Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM38O00635 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM38O00635 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM38O00635 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
TRIM38O00635 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM38O00635 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRIM38O00635 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM38O00635 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRIM38O00635 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRIM38O00635 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM38O00635 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRIM38O00635 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM38O00635 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM38O00635 AL691432.1-201ENST00000596308 1422 ntBASIC15.58■□□□□ 0.08
TRIM38O00635 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM38O00635 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM38O00635 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM38O00635 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM38O00635 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
TRIM38O00635 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM38O00635 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRIM38O00635 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM38O00635 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM38O00635 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM38O00635 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM38O00635 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM38O00635 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM38O00635 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM38O00635 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM38O00635 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM38O00635 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM38O00635 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM38O00635 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM38O00635 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM38O00635 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
TRIM38O00635 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM38O00635 RN7SL399P-201ENST00000471648 279 ntBASIC15.57■□□□□ 0.08
TRIM38O00635 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.57■□□□□ 0.08
TRIM38O00635 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRIM38O00635 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM38O00635 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM38O00635 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM38O00635 AC010319.3-201ENST00000597028 470 ntBASIC15.57■□□□□ 0.08
TRIM38O00635 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM38O00635 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM38O00635 RPSAP52-203ENST00000622976 1023 ntBASIC15.57■□□□□ 0.08
TRIM38O00635 COX11-210ENST00000639671 696 ntBASIC15.57■□□□□ 0.08
TRIM38O00635 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM38O00635 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM38O00635 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.57■□□□□ 0.08
TRIM38O00635 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM38O00635 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM38O00635 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRIM38O00635 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM38O00635 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM38O00635 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM38O00635 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM38O00635 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM38O00635 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM38O00635 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM38O00635 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM38O00635 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM38O00635 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM38O00635 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM38O00635 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TRIM38O00635 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM38O00635 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM38O00635 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM38O00635 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
TRIM38O00635 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM38O00635 AC126755.1-201ENST00000525846 6405 ntBASIC15.56■□□□□ 0.08
TRIM38O00635 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRIM38O00635 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM38O00635 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM38O00635 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM38O00635 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 AZGP1P1-201ENST00000411909 902 ntBASIC15.56■□□□□ 0.08
TRIM38O00635 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM38O00635 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM38O00635 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM38O00635 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM38O00635 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM38O00635 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM38O00635 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRIM38O00635 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM38O00635 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM38O00635 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM38O00635 AC015936.2-201ENST00000593177 259 ntBASIC15.56■□□□□ 0.08
TRIM38O00635 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms