Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 IGHEP1-201ENST00000521393 651 ntBASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 THY1-209ENST00000580275 578 ntTSL 3 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 AC021016.3-201ENST00000608367 477 ntBASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM88BA6NKF7 AC011840.2-201ENST00000563063 1520 ntBASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 AC020910.5-201ENST00000623668 1865 ntBASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 AP000322.3-201ENST00000608665 388 ntBASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM88BA6NKF7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.52■□□□□ 0.39
TMEM88BA6NKF7 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM88BA6NKF7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM88BA6NKF7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM88BA6NKF7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.52■□□□□ 0.39
TMEM88BA6NKF7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM88BA6NKF7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM88BA6NKF7 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM88BA6NKF7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM88BA6NKF7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM88BA6NKF7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM88BA6NKF7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 ENPP7P8-202ENST00000527856 1345 ntBASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 REXO1L5P-201ENST00000622260 2098 ntBASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 AL135901.1-201ENST00000451812 333 ntBASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 AC006122.1-201ENST00000493323 440 ntBASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM88BA6NKF7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM88BA6NKF7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms